Gene Cag_0797 details

Gene Information

• Locus tag: Cag_0797
• ID: 3747451
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 1117684
• End bp: 1119516
• Gene Length: 1833 bp
• Protein Length: 610 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637773327
• Product: citrate lyase, subunit 2
• Protein accession: YP_379106
• Protein GI: 78188768
• COG category: [C] Energy production and conversion
• COG ID: [COG0074] Succinyl-CoA synthetase, alpha subunit; [COG0372] Citrate synthase
• TIGRFAM ID: [TIGR01019] succinyl-CoA synthetase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.769324
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTATAG TAGCAAATAG AGATACACGA GCGGTCATTA TTGGTGGCGT TGCAGGTGTA 
AATGCCGCAA AACGTATGGC CCAATTCGAT TTTTTGGTAA ACCGTCCATT AACGGTACAA 
GCCTTTGTAT ATCCACCTGA AGAGGGGCAG CAAAAAGAGA TTTATCGTGG CGGTGAACTC 
AACAACGTTA CGGTATATGC CACTATTGAA AAAGCACTTG CAGAAAATCC AGAAATCAAC 
ACTGCATTGA TTTACCTTGG AGCTTCTCGT GCAACCCAAG CCGCTAAAGA GTGTCTTACA 
GCATCCAACA TCAAGCTGGT TACCATGATT ACCGAAGGTG TACCAGAAAA AGATGCTAAG 
ATCTTGCGCA AAATGGCAAA CGATCAAGGC AAAATGCTCA ACGGACCATC GTCTATTGGC 
ATTATGTCAG CAGGGGAGTG CCGTCTTGGT GTGATTGGTG GTGAGTTTAA GAATCTTAAG 
CTGTGCAACC TTTATCGTCA AGGTTCATTT GGTGTTATTA CCAAATCAGG CGGACTTTCC 
AACGAAACCA TGTGGCTTTG CGCCCAAAAT GGTGATGGCG TTACTTCAGC CGTAGCAATT 
GGTGGTGATG CTTACCCTGG TACCGACTTT GTTACTTACC TTCAAATGTT TGAAAACGAC 
CCTGCAACCA AAGCGGTTGT TATGGTTGGT GAAGTTGGTG GTACCCTTGA AGAGGAAGCC 
GCTGAATGGT ATGGACGTGA AAAACGTAGA ATTCGTTTAA TTGCTTCAAT TGGTGGAACA 
TGCCAAGAGG TGCTTCCACA AGGTATGAAG TTTGGACATG CTGGCGCTAA AGAGGGCAAA 
AAAGGGCTTG GCTCTGCTCG CTCAAAAATA AACGCTTTGC GCGAAGTAGG TGCCGTTGTT 
CCTGATACAT TTGGTGGACT AAGCAAAGCC ATTAAGCAAG TATATGAAGA ATTAAAAGCT 
GTTGGCATTA TTCAGCCCGA AGCTGAAATT GATGAAACGG TGCTGCCTGA TTTACCACTG 
AGCGTTCAGG AAGTAATGAA GCAAGGTGAA GTGATTGTTG AACCACTCAT TCGCACCACC 
ATTTCTGACG ATCGTGGTGA AGAGCCTCGT TATGTTGGCT ATGCAGCTTC AGAACTTTGC 
GAAAAAGGTT ATGGCATTGA AGATGTTCTT AGTCTTCTTT GGAGCAAAAA ACTTCCAACA 
CGCGAAGAAT CCGAAATCAT CAAACGTATT GTTATGATTT CGGCTGATCA CGGTCCTGCT 
GTGTCGGGTG CGTTTGGCTC AATTATTGCC GCATGTGCTG GTATTGATAT GCCTCAAGCA 
GTTTCCGCTG GTATGACCAT GATTGGACCA CGCTTTGGAG GCGCAGTTAC CAATGCTGGT 
AAGTACTTTA AGTTGGGTGT TAAAGAGTAC CCCAATGACA TTGCAGGCTT TTTAAGCTGG 
ATGAAGCAAA ACGTAGGTCC CGTACCCGGG ATTGGGCATC GCGTGAAGAG TGTGAAAAAC 
CCCGACAAGC GTGTAAAATA CCTTGTTGAT TATGTAAAAA ATCACACATC ATTGCATACG 
CCATGTTTAG ACTATGCACT TGAAGTTGAA AAAATTACCA CAGCGAAAAA GGGTAACCTT 
ATCTTAAACG TTGACGGTAC CATTGGCTGT ATTTTGGTTG ACCTCGACTT CCCAGAATAC 
TCATTAAATG GCTTCTTTGT GCTGGCTCGT ACTATTGGTA TGATTGGTCA CTGGATTGAT 
CAAAACAACC AGAATGCGCG TCTTATCAGA CTGTACGATT ACCTTATTAA CTACGCAGTT 
AAAGAAGAGC GTCCAGTTCC TGATAAAAAA TAA 

 

Protein sequence

MSIVANRDTR AVIIGGVAGV NAAKRMAQFD FLVNRPLTVQ AFVYPPEEGQ QKEIYRGGEL 
NNVTVYATIE KALAENPEIN TALIYLGASR ATQAAKECLT ASNIKLVTMI TEGVPEKDAK 
ILRKMANDQG KMLNGPSSIG IMSAGECRLG VIGGEFKNLK LCNLYRQGSF GVITKSGGLS 
NETMWLCAQN GDGVTSAVAI GGDAYPGTDF VTYLQMFEND PATKAVVMVG EVGGTLEEEA 
AEWYGREKRR IRLIASIGGT CQEVLPQGMK FGHAGAKEGK KGLGSARSKI NALREVGAVV 
PDTFGGLSKA IKQVYEELKA VGIIQPEAEI DETVLPDLPL SVQEVMKQGE VIVEPLIRTT 
ISDDRGEEPR YVGYAASELC EKGYGIEDVL SLLWSKKLPT REESEIIKRI VMISADHGPA 
VSGAFGSIIA ACAGIDMPQA VSAGMTMIGP RFGGAVTNAG KYFKLGVKEY PNDIAGFLSW 
MKQNVGPVPG IGHRVKSVKN PDKRVKYLVD YVKNHTSLHT PCLDYALEVE KITTAKKGNL 
ILNVDGTIGC ILVDLDFPEY SLNGFFVLAR TIGMIGHWID QNNQNARLIR LYDYLINYAV 
KEERPVPDKK