| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0744 |
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| Symbol | |
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| ID | 3746493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 1050357 |
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| End bp | 1051706 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637773276 |
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| Product | Type I secretion outer membrane protein, TolC |
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| Protein accession | YP_379056 |
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| Protein GI | 78188718 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.291612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTGTC ATTTAAAAAA AATAGCCTCA TTGCTGCTTT TGCTGGTGCT TAGTGTTTCA
GCATTTCCAT TGCACGCCGA AACCCTCGAC CTTGCAACAG CTTATCGTAA AGCTATGGAG
TACGATGCGC GACTTCGTGC GGCTAAAGCT GATAATGCCA TTTATCGCGA GGAAGTTGGC
AAAGCGCGTT CGCAGTTGCG CCCCAATATT CGAGGTAATG CCTCCCGTGG GCGTAGCACT
ACTCAACGAG GGAATAAGTA TGGCTTTTAT CCTGCCGACT CCTATAACAC GGTCAATTAT
GGCGTAACAT TTCGTCAAAC CATTTTTAAC TTTTCAAGTA CCGCCGCTTA CGATCAGGCA
AAGTTAGTTG CTATGAAGAG CGATACCGAT TTCCGAAAAG AAGAAGAAAT GGTAATGGTG
CGTATTGCCG AAGCATACTG CAACGTTCTT TTTGCCGAAG ATAATCTTGC CTTTAACAAT
AGCTTTAAAA CTGCCGCTAA AGAGCAATTG CAGCAAGCTA AAAAGAGGTT TGCTAAAGGG
GTTGGAACCT TAATTGAGGT TGAAGAGGCG CAAGCAAGTT ACGACCAAGC GGATGCACAA
GGTATTGACA TGCAAAACAA TCTTGAGTTT TCGCGTCGCG AGTTAGAGCA TCTTACGGGG
ATTTATCCAA GTGAACTTCG CGCTGTAGAT GCCGCTAAAT TACCGCTTTT TGCGCAACAG
GAATCGTTTG AGGTTTGGTT GGAACGTGCG CGTACGGCAA ATGCAAGTGT TGAAAGTGCT
CGGCATGAAA TTCTTATTGC TAAAAAAGAG GCAGCTAAAC AGCGAGGAGC ACAATATCCA
TCCTTAGAGT TAGTTGCAGG ACGTAATTAC TCTGAAAGTG AAAATAACTA CTCTATTGGT
GCTATTTACA ATACCTACTC CGTGAGTATG CAGTTAAGCT GGCCTATCTA CACCGGTGGA
TATGGAAGTT CCTCCATTCG TCAAGCTGAC GCAAAAAAAA TAAAGGCTGA AGAGCAATAC
AGCTTGCAAG TGCGCCAAAT GGAGTCGGAT GTCAGAAAAT ATTACAATAG CGTGGCAGGC
TCTATTGCGT TGGTGAAAGC CTATCAGCAA GCGGTAAATT CTCGTGAAGT GGCTTTAAAA
GGGATGAAGA GGGGCTTTCA GGCTGGATTG CGTAGCAACG TTGAGGTGCT TGATGCCGAG
CAAAAGCTTT TTGCCAGCCG TCGCGATTTA GCAAAATCGC GCTATCAATA CATTTTAAAT
CTTTTGATGT TAAAGCAAGC GGCAGGCGTA TTGCAACCTC AAGATGTTGA TGAGGTGAAT
GGTTGGTTTG CTAAAGCATC CTTAAAGTGA
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| Protein sequence | MRCHLKKIAS LLLLLVLSVS AFPLHAETLD LATAYRKAME YDARLRAAKA DNAIYREEVG
KARSQLRPNI RGNASRGRST TQRGNKYGFY PADSYNTVNY GVTFRQTIFN FSSTAAYDQA
KLVAMKSDTD FRKEEEMVMV RIAEAYCNVL FAEDNLAFNN SFKTAAKEQL QQAKKRFAKG
VGTLIEVEEA QASYDQADAQ GIDMQNNLEF SRRELEHLTG IYPSELRAVD AAKLPLFAQQ
ESFEVWLERA RTANASVESA RHEILIAKKE AAKQRGAQYP SLELVAGRNY SESENNYSIG
AIYNTYSVSM QLSWPIYTGG YGSSSIRQAD AKKIKAEEQY SLQVRQMESD VRKYYNSVAG
SIALVKAYQQ AVNSREVALK GMKRGFQAGL RSNVEVLDAE QKLFASRRDL AKSRYQYILN
LLMLKQAAGV LQPQDVDEVN GWFAKASLK
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