| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0729 |
|---|
| Symbol | |
|---|
| ID | 3747425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 1005202 |
|---|
| End bp | 1007253 |
|---|
| Gene Length | 2052 bp |
|---|
| Protein Length | 683 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637773263 |
|---|
| Product | peptidase S41A, C-terminal protease |
|---|
| Protein accession | YP_379043 |
|---|
| Protein GI | 78188705 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCCT GCCGCGTTGA AGCGTTTTGG CCACTTGCCA CCTCGCGTGC AGCTTCAGCA
ACCACGCTTC AGCCAACTGC CCTGCACGAT GAAACGGGCA AATATATTAG CCAAACGCTG
TTGCAGTACC ATTACCGTAA ACCAGCAACA AACGATTCGC TGTCACTGCA AATTTTTAAC
CGTTACTTGG AGCAGCTTGA TGGTAGCAAA AGCTACTTTG TGGCTTCGGA GGTGGAAAGT
TTGCGCAAAG TGTATGGCAC TCGCTTTGAT GATGAATTAC TTGCAGGGAA GTCGAAAAGC
GGCTTTGGCA TGTACAACTT TTTTTTAAAG CGTGCAAAAG AGAAAATGCG CTTTATGAAA
GCAACTGCCG ATACCGCTCG CTTTAGCTTT ATGCAACCTG AGGAATTTGA GCTTGACAGA
AAGCGCACTC CATTTCTTCC CGATAGGCGC CAACTTACCG CGCTTTGGCG ACGAGAGTTA
AAATATCAGT GGCTTACCCT AAAGCATAGT GGCGAAAAAA ACAGTTCTAT TCGTGCCGAG
CTTTCTAAAA GCTATGCAAG CCGTTTAAGC TTGTTGCAAC GCCAAACGCC AAACGATGCT
TTTCAAAGTT ACATGGCAGC CGTTACCACT TCGTTTGACC CGCATACTAG CTATTTATCG
CCCGACGACT ATACCAATTT TCAAATTGAT ATGAGCCGTT CGCTTGAAGG TATTGGTGCG
AAGCTCCAAA CCGAAGGGCA ATACACGGTA GTGGGTGAAA TTATTCCGGG TGGACCTGCC
TTTAAAACAG GTTTTGTTAA AAAGGGTGAT AAAATAATTG CCGTAGGGCA GGGAAGTAGT
GCGCCTATGG TGGATGTTAC GGGCTGGCGC ATTAACGATG TGGTCAAGCA AATTCGTGGA
CCAAAAAACA GCATAGTACG TTTAAAAATA TTGCCAGCAA GTCAAGGTGG AGTAGCTTCC
ACTAAGGTGG TGCAGTTAGT TCGCGAAAAA ATTGATTTGC AAGAACAAGC TGCCCGCAAA
AGCATTATTC AGCAAAATGG ATTGAAAATT GGCGTTATCA CCATTCCCTC ATTTTATCTT
GATTTTGAAG GGCAACAAAA GCAAGCCACC AACTATGCTA GCACAAGTCG CGATGTTGCC
CGCATTGTGG AGGAACTGCA ACGTGAGGAA TTAAGCGGCA TTATTCTTGA TTTGCGCGAT
AATGGTGGAG GCTCGCTTGA AGAGGCAGTG AACGTTACGG GGCTTTTTAT TACAAGCGGT
CCTGTGGTGC AGGTGAGCAA TGCTTCAGGC GGCAAAAGCG TTGTGCGCGA TGACGACCGC
CGCATTTTTT ACAGCGGTCC ACTTGCCGTG TTGGTGAATC GTTATAGCGC TTCAGCTTCT
GAAATTGTAG CGGCGGCTAT GCAAGATTAT AAACGAGGCA TTGTTATTGG TGAACGCACC
TTTGGTAAAG GCACCGTGCA AAGCATTGTT AAGCTTACAC GTCCCTTTCA CTTTTTTGGC
AAAGCGCCAG AGTTTGGTCA GCTTAAGCTT ACCGTAGCAA AATTTTACCG CATTTCAGGC
GGTAGTACCC AGCACAAAGG TGTAGTGCCC GATATTACCA TGCCGTCACT GATTGATACC
TCAAGCGTTG GTGAGGATAC TTATAGCAGC AGTTTGCCAT GGAGCACCAT TTCACCTGCC
CTATTCCGTC CTATTGCCGA TGTTACGCCC GAGCATGTTA CCCAGTTGCG CCAAAAGCAG
CAAGTGCGTA TTGATACCTC ACGTCTGTAC AAAACCTACA TGCGTGATCT TGCAACGCTT
AACCGCATTC GCAAGAAAAA AAGCATCACC TTACAAGACT CCTCCTTTAA GTCGGATGTA
GAAACGCTCC GCCAAATTGA AAAAAATTGG GGTGAAAGTA ATGAGCTGGA TTCAACGCAC
ACGAAAAGTG GTGGTAAAGC TTTAGAGCGC GATGTGTTGT TGCAACAATC CTCAGCGGTT
ATGGCGGATT TTGTGGAACT TAAAACTACC GAACGCCAAA CGGTTATTCG TGCGGTGCCC
GCGTTGAATT AA
|
|---|
| Protein sequence | MPPCRVEAFW PLATSRAASA TTLQPTALHD ETGKYISQTL LQYHYRKPAT NDSLSLQIFN
RYLEQLDGSK SYFVASEVES LRKVYGTRFD DELLAGKSKS GFGMYNFFLK RAKEKMRFMK
ATADTARFSF MQPEEFELDR KRTPFLPDRR QLTALWRREL KYQWLTLKHS GEKNSSIRAE
LSKSYASRLS LLQRQTPNDA FQSYMAAVTT SFDPHTSYLS PDDYTNFQID MSRSLEGIGA
KLQTEGQYTV VGEIIPGGPA FKTGFVKKGD KIIAVGQGSS APMVDVTGWR INDVVKQIRG
PKNSIVRLKI LPASQGGVAS TKVVQLVREK IDLQEQAARK SIIQQNGLKI GVITIPSFYL
DFEGQQKQAT NYASTSRDVA RIVEELQREE LSGIILDLRD NGGGSLEEAV NVTGLFITSG
PVVQVSNASG GKSVVRDDDR RIFYSGPLAV LVNRYSASAS EIVAAAMQDY KRGIVIGERT
FGKGTVQSIV KLTRPFHFFG KAPEFGQLKL TVAKFYRISG GSTQHKGVVP DITMPSLIDT
SSVGEDTYSS SLPWSTISPA LFRPIADVTP EHVTQLRQKQ QVRIDTSRLY KTYMRDLATL
NRIRKKKSIT LQDSSFKSDV ETLRQIEKNW GESNELDSTH TKSGGKALER DVLLQQSSAV
MADFVELKTT ERQTVIRAVP ALN
|
|---|
| |