| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0672 |
|---|
| Symbol | |
|---|
| ID | 3747545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 945055 |
|---|
| End bp | 946158 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637773208 |
|---|
| Product | pyridoxal phosphate-dependent enzyme |
|---|
| Protein accession | YP_378988 |
|---|
| Protein GI | 78188650 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.225626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTAA TGAATGATTT TAAAGCCGAA CCACCTGAGC TACGTGAAGC TATGTTGGGT
GCAGCTCAAC GGGTTATTGA GTCGGGATGG TATGTGCTTG GTAACGAAGT TGTATCTTTT
GAAAAGCAAT GGGCAGCTAT TTGCGGTGTT GATTATGGTA TTGGGGTTGG CAATGGGATG
GATGCTATTG AAATAGCTTT GTGTTCATTA AGTATTGGTG TTGGTGATGA AGTAATTACT
ACTCCAATGA CCGCGTTTGC TACTGTTTTA GCTATTTTAC GTTCTGGCGC TATTCCTGTG
CTTGCTGATA TTGATAGTGA TACAGGATTA TTGTCTATAG AAAGCGTTCG GCGTTGTATA
TCCAAAAAAA CAAAAGCTAT TCTACTTGTT CATTTGTATG GTCAGGTTCG TGATATGGAT
AAATGGACGG CATTATGTAA GGCAACCGAT CTTTACCTTG TAGAAGATTG TGCACAAGCG
CATTATGCTC AATGGCAAGG TAATGTTGCA GGAAGTTTTG GGATAGCAGG TGCTTATAGT
TTTTATCCTA CAAAAAATTT AGGGGCTATT GGTGATGCAG GCATGTTAAT TACTAACGAT
GCAGACATTG CAGATAAAGC AAAACGATTA CGTAATTATG GTCAAAGTAC TCGTTATTAT
CATCCAGAAC TTGGAATGAA TAGCCGTCTT GATGAGCTTC ATGCTGCGAT GCTTTCGGAA
AGGGTAAAGT GGTTACATAG TTTTACAGAG CGACGTTGGC AAATTGCAGA ATATTATCGT
GAACATATTG ATAACCCATT GATTAACCTA TTATCAGCAC CAGAAGAACG TACAGCTCAT
GTTTATCATC TCTACGTAGT AACTACTGCG TATCGTGATG CACTTCAAGT TTATTTGCAG
GAAAATCAAA TACAAGCATT GATTCACTAT CCGATCCCTG TCCATTTTCA AGATCCATGT
AAAAATATTT TGCGTGATCC AAAGGGACTC GCAAAAAGTG AATACCATGC AGCCCAGTGT
TTATCGCTAC CATGTCATCC ACAAATGAGC GATGCTGATA TTGAACATGT AGCTAATACG
GTTAATAGTT TTAAGGTTTC TTGA
|
|---|
| Protein sequence | MILMNDFKAE PPELREAMLG AAQRVIESGW YVLGNEVVSF EKQWAAICGV DYGIGVGNGM
DAIEIALCSL SIGVGDEVIT TPMTAFATVL AILRSGAIPV LADIDSDTGL LSIESVRRCI
SKKTKAILLV HLYGQVRDMD KWTALCKATD LYLVEDCAQA HYAQWQGNVA GSFGIAGAYS
FYPTKNLGAI GDAGMLITND ADIADKAKRL RNYGQSTRYY HPELGMNSRL DELHAAMLSE
RVKWLHSFTE RRWQIAEYYR EHIDNPLINL LSAPEERTAH VYHLYVVTTA YRDALQVYLQ
ENQIQALIHY PIPVHFQDPC KNILRDPKGL AKSEYHAAQC LSLPCHPQMS DADIEHVANT
VNSFKVS
|
|---|
| |