Gene Cag_0664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_0664 
Symbol 
ID3747537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp936305 
End bp937204 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content35% 
IMG OID637773200 
Productputative transcriptional regulator 
Protein accessionYP_378980 
Protein GI78188642 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGCATG AGATAATTGA TGGTAAGCAA CTTCTTATAG TACGAGTACG TAAAGGATAT 
GCTAAACCTT ATGCAACCAG TAGTGGAGTT TATTTAACTA AATCCGGTTC TGATAAACGC
AAAATGTCGC GTGAGGAACT TAGAAGGCTT TTTGCCGAAA GTGGTGGTTT ATCAGCAGAT
GAAACAGTTA TTCATGGTTC GGATATTCGT GATATCAATA CGGAAATTTT AAATGATTTT
TTGATAAAGC GCGATAGAGA GATATTTGAA GCTCTTAGAG CTCAACGTGT TCAGTTGGTA
ACGATTTGTG AAAATCTTGA TCTTGTTGCT CATGGTCAAC TTACCTTAGC GGGAAATCTT
TTATTTGGTC GTGAGCCACA ACGCTTTTCA AAGTCATTTT ATGTGCAGTG TGTGCATTTT
GATGGAAATG ATGTTGGTTG TAATTCCTTC ATTTCCAAAG ATATTATATA TGGAACATTG
CAATCAATGT ATAAGCAAAC ATTAAATTTT CTTAAAAGTA GTCTTCGTAG AGTTCAGAAA
GGTAAAAATT TTAATACACT TGGAGAGTTT GAAATTCCTG AGATTTGCTT GACTGAAGCG
TTAATTAATG CACTCATTCA TCGCGATTAT TTTATTAGTT CTTCAATTAA AGTCTTTATT
TTTGAAGATC GTGTAGAAAT TATAAGTCCA GGGAAGTTAC CTAATTCTTT GAGTGTTGAG
AAAGTAAGGC TTGGTATTTC CATACATCGT AATCCTATTC TCAATTCATT AGGTCAATAT
TTATTGCCGT ATAGTGGGCT TGGGAGTGGA ATTAGACGGA TTGAGGCTCA TTATCCTTTG
GTTAAGTTTT TTAACGATAC CGATAAAGAA GAGTTTCGGT GTGTGTTTTT TCGGAGTTAA
 
Protein sequence
MEHEIIDGKQ LLIVRVRKGY AKPYATSSGV YLTKSGSDKR KMSREELRRL FAESGGLSAD 
ETVIHGSDIR DINTEILNDF LIKRDREIFE ALRAQRVQLV TICENLDLVA HGQLTLAGNL
LFGREPQRFS KSFYVQCVHF DGNDVGCNSF ISKDIIYGTL QSMYKQTLNF LKSSLRRVQK
GKNFNTLGEF EIPEICLTEA LINALIHRDY FISSSIKVFI FEDRVEIISP GKLPNSLSVE
KVRLGISIHR NPILNSLGQY LLPYSGLGSG IRRIEAHYPL VKFFNDTDKE EFRCVFFRS