Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0657 |
Symbol | |
ID | 3747530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 930370 |
End bp | 931527 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637773193 |
Product | putative transcriptional regulator |
Protein accession | YP_378973 |
Protein GI | 78188635 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.194476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTGTG ATGATCTTAA AGGGTTAATT GCAAGCGGTG AAGATAGCTT TACGCAGTTT AAAGAGAATA TTTTTGATTC AAAAAAATTA GCTGAAGAGT TTGTTGCATT TTCTAATGCA GAAGGTGGAG TGATTTTGTT GGGAGTAAAT GATAAAAGGG AATTAGTTGG TTTAGATAAT GCTGATATTC ACCGTTTAAA TCAATTAATT TCAAATACAG CTAATGAAAA TGTTAAACCA CCCATTTATC CTCTTGTGGA GCATGAGATA ATTGATGGTA AGCAACTTCT TATAGTACGA GTACGTAAAG GATATGCTAA ACCTTATGCA ACCAGTAGTG GAGTTTATTT AACTAAATCC GGTTCTGATA AACGCAAAAT GTCGCGTGAG GAACTTAGAA GGCTTTTTGC CGAAAGTGGT GGTTTATCAG CAGATGAAAC AGTTATTCAT GGTTCGGATA TTCGTGATAT CAATACGGAA ATTTTAAATG ATTTTTTGAT AAAGCGCGAT AGAGAGATAT TTGAAGCTCT TAGAGCTCAA CGTGTTCAGT TGGTAACGAT TTGTGAAAAT CTTGATCTTG TTGCTCATGG TCAACTTACC TTAGCGGGAA ATCTTTTATT TGGTCGTGAG CCACAACGCT TTTCAAAGTC ATTTTATGTG CAGTGTGTGC ATTTTGATGG AAATGATGTT GGTTGTAATT CCTTCATTTC CAAAGATATT ATATATGGAA CATTGCAATC AATGTATAAG CAAACATTAA ATTTTCTTAA AAGTAGTCTT CGTAGAGTTC AGAAAGGTAA AAATTTTAAT ACACTTGGAG AGTTTGAAAT TCCTGAGATT TGCTTGACTG AAGCGTTAAT TAATGCACTC ATTCATCGCG ATTATTTTAT TAGTTCTTCA ATTAAAGTCT TTATTTTTGA AGATCGTGTA GAAATTATAA GTCCAGGGAA GTTACCTAAT TCTTTGAGTG TTGAGAAAGT AAGGCTTGGT ATTTCAATAC ATCGTAATCC TATTCTCAAT TCATTAGGTC AATATTTATT GCCATATAGT GGGCTTGGCA GTGGCATTAG AAGGATTGAA GCTCATTATC CTTCGGTTAA GTTTATTAAC GATACCGATA AAGAGGAATT TTGGTGTGTG TTTTCTCGGA GTATATAG
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Protein sequence | MFCDDLKGLI ASGEDSFTQF KENIFDSKKL AEEFVAFSNA EGGVILLGVN DKRELVGLDN ADIHRLNQLI SNTANENVKP PIYPLVEHEI IDGKQLLIVR VRKGYAKPYA TSSGVYLTKS GSDKRKMSRE ELRRLFAESG GLSADETVIH GSDIRDINTE ILNDFLIKRD REIFEALRAQ RVQLVTICEN LDLVAHGQLT LAGNLLFGRE PQRFSKSFYV QCVHFDGNDV GCNSFISKDI IYGTLQSMYK QTLNFLKSSL RRVQKGKNFN TLGEFEIPEI CLTEALINAL IHRDYFISSS IKVFIFEDRV EIISPGKLPN SLSVEKVRLG ISIHRNPILN SLGQYLLPYS GLGSGIRRIE AHYPSVKFIN DTDKEEFWCV FSRSI
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