Gene Cag_0657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_0657 
Symbol 
ID3747530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp930370 
End bp931527 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content34% 
IMG OID637773193 
Productputative transcriptional regulator 
Protein accessionYP_378973 
Protein GI78188635 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.194476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTGTG ATGATCTTAA AGGGTTAATT GCAAGCGGTG AAGATAGCTT TACGCAGTTT 
AAAGAGAATA TTTTTGATTC AAAAAAATTA GCTGAAGAGT TTGTTGCATT TTCTAATGCA
GAAGGTGGAG TGATTTTGTT GGGAGTAAAT GATAAAAGGG AATTAGTTGG TTTAGATAAT
GCTGATATTC ACCGTTTAAA TCAATTAATT TCAAATACAG CTAATGAAAA TGTTAAACCA
CCCATTTATC CTCTTGTGGA GCATGAGATA ATTGATGGTA AGCAACTTCT TATAGTACGA
GTACGTAAAG GATATGCTAA ACCTTATGCA ACCAGTAGTG GAGTTTATTT AACTAAATCC
GGTTCTGATA AACGCAAAAT GTCGCGTGAG GAACTTAGAA GGCTTTTTGC CGAAAGTGGT
GGTTTATCAG CAGATGAAAC AGTTATTCAT GGTTCGGATA TTCGTGATAT CAATACGGAA
ATTTTAAATG ATTTTTTGAT AAAGCGCGAT AGAGAGATAT TTGAAGCTCT TAGAGCTCAA
CGTGTTCAGT TGGTAACGAT TTGTGAAAAT CTTGATCTTG TTGCTCATGG TCAACTTACC
TTAGCGGGAA ATCTTTTATT TGGTCGTGAG CCACAACGCT TTTCAAAGTC ATTTTATGTG
CAGTGTGTGC ATTTTGATGG AAATGATGTT GGTTGTAATT CCTTCATTTC CAAAGATATT
ATATATGGAA CATTGCAATC AATGTATAAG CAAACATTAA ATTTTCTTAA AAGTAGTCTT
CGTAGAGTTC AGAAAGGTAA AAATTTTAAT ACACTTGGAG AGTTTGAAAT TCCTGAGATT
TGCTTGACTG AAGCGTTAAT TAATGCACTC ATTCATCGCG ATTATTTTAT TAGTTCTTCA
ATTAAAGTCT TTATTTTTGA AGATCGTGTA GAAATTATAA GTCCAGGGAA GTTACCTAAT
TCTTTGAGTG TTGAGAAAGT AAGGCTTGGT ATTTCAATAC ATCGTAATCC TATTCTCAAT
TCATTAGGTC AATATTTATT GCCATATAGT GGGCTTGGCA GTGGCATTAG AAGGATTGAA
GCTCATTATC CTTCGGTTAA GTTTATTAAC GATACCGATA AAGAGGAATT TTGGTGTGTG
TTTTCTCGGA GTATATAG
 
Protein sequence
MFCDDLKGLI ASGEDSFTQF KENIFDSKKL AEEFVAFSNA EGGVILLGVN DKRELVGLDN 
ADIHRLNQLI SNTANENVKP PIYPLVEHEI IDGKQLLIVR VRKGYAKPYA TSSGVYLTKS
GSDKRKMSRE ELRRLFAESG GLSADETVIH GSDIRDINTE ILNDFLIKRD REIFEALRAQ
RVQLVTICEN LDLVAHGQLT LAGNLLFGRE PQRFSKSFYV QCVHFDGNDV GCNSFISKDI
IYGTLQSMYK QTLNFLKSSL RRVQKGKNFN TLGEFEIPEI CLTEALINAL IHRDYFISSS
IKVFIFEDRV EIISPGKLPN SLSVEKVRLG ISIHRNPILN SLGQYLLPYS GLGSGIRRIE
AHYPSVKFIN DTDKEEFWCV FSRSI