| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0648 |
|---|
| Symbol | |
|---|
| ID | 3747325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 921085 |
|---|
| End bp | 921897 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637773184 |
|---|
| Product | polysaccharide export periplasmic protein |
|---|
| Protein accession | YP_378964 |
|---|
| Protein GI | 78188626 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0639138 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCAGC ATCGGTTGTT TCTTCATCTT TTTTTTGTCG GCTCATTAGC TTTATTGCTT
AATGGTTGTG CTTCCTATCG TAATTTACCT GCTGGTTCCC ATCAACATAT AACGGCTAAG
CCAAATTCCA CTATAAGCCG TGAGGCAGTT GTTATTGCTG ACCCTAATTC CTCACAAGAT
TCTTCTTATA AGCCGTCTGA TTATAGAGTA GGTCCAAATG ATGTGCTTTA TGTAAATGTA
AGTGGTAAGC CTGAATTTAT TGGAACGGCT GGAGGTTCAT CCTCTTTTAA AGGATATAGG
GTTGATGGAC GTGGCTATAT TTATTTGCCT ATTGCAGGTA AAGTATCTGT TGCTGGATTA
CCAATGTATG AGGTGCGTCA AAAAATTCAA GAGGTTATGC GCCGTTATTT TAATGATCCC
TGGGTGGTTG TTGAAATTGC TGAATATCGA ACACGGCAAA TTTTTGTGTT TGGTGCTGTT
AAAAAGCCGG GTCCACAAGT GATACCATCT TTGGGAATTA ATATTGCTCA AGCTCTGGCA
AGTGCCGATG TACAAAACTC AGGGCAGAAT TATAAAAAAA TTCGCATTAT CCGATCTTTA
TCGCCAACTG AGGGTGAGTT GCTTGTGGTG GATTTTGATA GTGTATTGCA TGGCAGATCG
CTTCCTATGC AGTTACAAGA AGGTGATATT GTTTATGTTC CAAAGAGTAC CTTAGCAAGT
TGGAATACTA CAATTTCCGA GTTATTGCCT TCATTACAAG CATTTAGTGC TGTATTGCAG
CCATTTGTTA ATATAAAGTA TTTACAAGAT TAG
|
|---|
| Protein sequence | MRQHRLFLHL FFVGSLALLL NGCASYRNLP AGSHQHITAK PNSTISREAV VIADPNSSQD
SSYKPSDYRV GPNDVLYVNV SGKPEFIGTA GGSSSFKGYR VDGRGYIYLP IAGKVSVAGL
PMYEVRQKIQ EVMRRYFNDP WVVVEIAEYR TRQIFVFGAV KKPGPQVIPS LGINIAQALA
SADVQNSGQN YKKIRIIRSL SPTEGELLVV DFDSVLHGRS LPMQLQEGDI VYVPKSTLAS
WNTTISELLP SLQAFSAVLQ PFVNIKYLQD
|
|---|
| |