| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0647 |
|---|
| Symbol | |
|---|
| ID | 3747324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 919985 |
|---|
| End bp | 921058 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637773183 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_378963 |
|---|
| Protein GI | 78188625 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.029233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCATTCT TTGACTCCCA ACATCCTGTA TTTTTTATTT TAGCAACACT TGTTAGTAGT
GTTGGCTTAT GGGCTATTGT AGCAACCCAG CATTTGCATG GTGAGCATTC CCACGACACC
TCTGAAGGTC CACAAAAATT TCATTCCTTA CCTACTCCTC GCATTGGTGG TTTAGCAATA
GCTTTAACGC TGTTCGGTTT CTCTTCCTTT ATATCATCGT TAGCTCTTGT AACTATTATT
GCAGCTTTGC CTGCTTTTTT GGCAGGATTA TTAGAGGATT TAACTAAAAG AGTTTCACCT
CGTAGTCGCC TTATTGCAAC GTTTATAAGT GCTATTGTTG CATGGTGGTT AACGGGTTAT
CATATTACTT CGCTTGATAT TTCTTTTATA GATTCATTGT TAGTTTATTT GCCACTTTCG
CTTCTCTTTA CATCATTTGC TGTTGCCGGG GTAGCTCATG CCGTGAATAT GATAGATGGT
TTTAATGGGC TTGCAGGTGG TACCTTATTT TGTATGATAG GGGCATTTAC TCTAATAGCT
TATAGTTTTG GTGATCTTGA AATTGTTTCC TTAGGAGTAT TAATACTTTC TGTTTTGGCA
AGCTTTTTGT TTTTTAATTT TCCATTTGGA AAAATATTTA TGGGGGATGG TGGGGCGTAC
CTCATGGGTT TTTTAGTTGC ATGGATAGCA GTGATGTTGC CAATGCGTCA TCCTGATGTG
TCGCCATGGG CTTCTTTAGT TATTTGCTCT TATCCTGTTA ATGAAGCTTT ATTTTCAATT
GGACGGCGTG CACTACAAAA AATGTCGCTT GGGCAGCCTG ATAGTGAGCA TCTCCATAGT
TTGATTAAAA AAAATATTAT TCGTCCAAAC TTTTCATATT TAGAGCCTCA TTTTCGTAAT
AGTATGGTTG CGCCATTATG TTGGCTTTAT GCTTTAGTTC CAATTATTTT AGCCGTTACC
TTTTACGAGT CAATCGTAGT GCTTATAGCA ATATGGATTG GTAGTATTGT TTTATATATG
CTTCTTTATT GGTTTGTTGC TCGTTTAGCT ATTAATAAAG AATCATTACT GTAA
|
|---|
| Protein sequence | MPFFDSQHPV FFILATLVSS VGLWAIVATQ HLHGEHSHDT SEGPQKFHSL PTPRIGGLAI
ALTLFGFSSF ISSLALVTII AALPAFLAGL LEDLTKRVSP RSRLIATFIS AIVAWWLTGY
HITSLDISFI DSLLVYLPLS LLFTSFAVAG VAHAVNMIDG FNGLAGGTLF CMIGAFTLIA
YSFGDLEIVS LGVLILSVLA SFLFFNFPFG KIFMGDGGAY LMGFLVAWIA VMLPMRHPDV
SPWASLVICS YPVNEALFSI GRRALQKMSL GQPDSEHLHS LIKKNIIRPN FSYLEPHFRN
SMVAPLCWLY ALVPIILAVT FYESIVVLIA IWIGSIVLYM LLYWFVARLA INKESLL
|
|---|
| |