| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0615 |
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| Symbol | |
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| ID | 3746308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 827589 |
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| End bp | 829322 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637773149 |
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| Product | Outer membrane protein-like |
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| Protein accession | YP_378931 |
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| Protein GI | 78188593 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00243369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAC AAATTTTTCT CACGATAAAC CAGTTAGTTA TCATGAAACA GCATCAGAAT
ATATCCACCA TGGGTGGAAA GATAATTGCC ATAGCGCTAC TTGCCCCGCT TTTTGGCTTT
AGCCAACCTT CCACCAGCAA AGCGGCGGAA GGGGATTCAG CCCCCTCCCA AGCCACGTTA
GCCCCAGCAA TAAGCGCTGC CGACATGCAA GCCTCCCCAA GCGTCCAAAC CGCCCCAACC
ATCGTTGCAG CCCCCCAAGT TCCAACGGCA AGTGGTTTGC GCTTGCAACA ATTCTTAGCC
TCCGTGGTTG ACAACAACGA TGAAATTAAG GTGCAAAAGC TTGAGTGGCT CTCAAACGAG
CGCTTACTCA AAGCCTCGCG TGGCATGTAT GAGCCTGTCT TAAAAGTCTC GGCAACGCGC
GAAAGCAACC ACATGCAAAA CACCGCGCAA GAGTATCTGC AAACTTACTC CCAGCACTAC
GAATTTTCGG AAGCCAACAA CATTTGGAGT TCATCCATAG AAGGCTTGAC CCCTTTTGGG
AGCACCTATC GTCTTGGGTA TGATTACAAA AAGCTGCAAA ACAGCTTGCA ATCGGCAATG
GCAGTTCCTA CCGATGAAGA GTATGTAACC TTTCTTGGGC TTACGCTCAC GCAACCACTT
TTAAAAGGTT CGGGGCAGGA AGCCACCAAT GCCAACATCC GTATTTCTCG AGCTAATGCC
GACATTGCTT ACGAAGGGTA TCGCCAAGCA AGCGTTGAAG CGGTAGCTCG TGCCGTGCAG
TTGTATTGGC AATGTTACGG AGCGCAAGAA AAGCTTGCCA TGCGTCAACG CTCAGCCACT
ATTGCCGAAG AGCTACTTCA GGCAAACAAA AGCCGTTATG AGGCAGGTAA GGTTGATTAC
ACCGCCGTGC TTGATGCCGA ATCGGGGTTG CGCTTACGCC AAGCCTTAGT AGCCGCCGCC
GAGCAAACGG AGCTAACTTC CCGCAAAAAT TTGCTGTCGT TAGCGGGGGA GTCAGCCATG
GCTCAAGTAC CAGCAACCAT TCGTATGGAA GATGTGCCCG ATTGTTCACC ACTTTCGCCC
GACTACAAGC AAGTGTATGA AAAAGCCTTA ACAAGCTATC CGCAATACCT GAGCGCCCTT
GCAACGGTAG AGCGCGAAAA CTTTCGAGCC ACTTACGCAC ACAATCAAGA AAAACCGCAG
CTTGACGTTA AAGGCAGCTA CGGTTATAAC GGCTTAGGCA CTACGGTAGA TAACTCGCTT
GACCGCCTTG GTTCCACCGA TTTTCCCTCA TGGAGCGTAG GGCTTGAGCT GACCTTTCCG
CTGATTGGCG ACATGAAAAG CCGCAACGAA GCTACAGCCG CCCGCTTGAA AAAAGAGCAA
GCCATTCGCC GCCTTGAAAT GCAAAAAATT GAGCTATCCA ACCAAATGGA TATAGTAGCG
GGATTAGTAA GTAGAGTTTA TAGCCAAGTA CAGAATTACG AAAAAGTGGT AGCCATTAAT
GCCGAGTTAG TACGCATTGA GGATACTCGT TTTAAATTAG GTAAAAGCGA TACACGAATG
CTGTTGGAAC GCGAAGAAGA GTATCTAAAA GTAAGCGAAA GTTTGCTTGA TAGCCGTCTT
GCCTATCAAT ATGCGTTAGT GAACCTTTAT GCTCTTGAAG GGAGCTTGCT GACGCGCTAC
GGTTTAACGC TTTCCGATAA AACAAGCGCT ACTACTTTAA CGCAAGGGAT GTAA
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| Protein sequence | MSQQIFLTIN QLVIMKQHQN ISTMGGKIIA IALLAPLFGF SQPSTSKAAE GDSAPSQATL
APAISAADMQ ASPSVQTAPT IVAAPQVPTA SGLRLQQFLA SVVDNNDEIK VQKLEWLSNE
RLLKASRGMY EPVLKVSATR ESNHMQNTAQ EYLQTYSQHY EFSEANNIWS SSIEGLTPFG
STYRLGYDYK KLQNSLQSAM AVPTDEEYVT FLGLTLTQPL LKGSGQEATN ANIRISRANA
DIAYEGYRQA SVEAVARAVQ LYWQCYGAQE KLAMRQRSAT IAEELLQANK SRYEAGKVDY
TAVLDAESGL RLRQALVAAA EQTELTSRKN LLSLAGESAM AQVPATIRME DVPDCSPLSP
DYKQVYEKAL TSYPQYLSAL ATVERENFRA TYAHNQEKPQ LDVKGSYGYN GLGTTVDNSL
DRLGSTDFPS WSVGLELTFP LIGDMKSRNE ATAARLKKEQ AIRRLEMQKI ELSNQMDIVA
GLVSRVYSQV QNYEKVVAIN AELVRIEDTR FKLGKSDTRM LLEREEEYLK VSESLLDSRL
AYQYALVNLY ALEGSLLTRY GLTLSDKTSA TTLTQGM
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