Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0603 |
Symbol | |
ID | 3746296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 706047 |
End bp | 707753 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637773137 |
Product | RecJ exonuclease |
Protein accession | YP_378919 |
Protein GI | 78188581 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACGAT ATCGTTGGAA GTGCTTCATG CCACATGAGG AAACAGTTGC GGCATTATCG GAGTCCATTA ATGTGTCGCA GCCTATTGCG CGTGCGTTGT GTAATCGTGG CATTTCCACT TACAACGAGG CTAAAGAGTT TTTTCGTCCT GTGCTTTCCA CCCTTCACTC TCCATGGCTT TTTAACGATA TGGAGCGTGC GGTAGAGCGT TTGGTTCGTG CTCTTAAAAA TGGTGAAACC ATTTTGTTGT ATGGCGATTA CGATGTTGAT GGCACTACGG GCGTAGCGCT TTTGCTGCTC TTTTTGCGCC ATCACGGCGT TGAGCCGTTG TGGCATATTA ATGATCGTTT TGCGGAAGGG TACGGTTTAT CGCCCGAAGG AATTGATCGA GTTATTGCAA GCGGTACAAC CTTGCTGATA ACGGTGGATT GCGGTATTAA AGATCATGCG GCTATTCGGC GTTGCGGGGA GCATGGCGTT GAGGTGATTG TGTGCGATCA CCACGAAGCC GATGTTACGC CTGAAGCCTA TGCTATTTTA AATCCTAAAG TGGTTGGTTC GGGCTATCCT TTTCGTGAAC TGTGCGGGTG TGCGGTGGCG TTTAAGTTGG TGCAAGCGCT TGCTGAGCGT TTGGGTGATA GTGAGGCGGT GTGGCATCAA TTTCTTGATT TAGTTGCCGT TGCAACGGCG GCGGATTTGG TGTCGCTCAC GGGCGAAAAT CGCACGTTGG TGATTGAAGG GTTGCAGCAA ATGCGCTCTA AGCCACGCAA AAATTTTAGC GAAATGTTTC GGGTTATGAA GGTTTCGCTT GGCGATGTTC GGATGTTTCA TCTTGCTTTT GGCATTGCGC CGCGCATTAA TGCGGCTGGA AGAATGCACT CGGCGCATCT TGCGCTTGAG TGGCTGCTGG CAAGTGCGCC CGATGCGGTG GAGCAGCACA CGGAGGCGCT TGAGCGGGTG AATGTGCAGC GCCGTTCGCT TGATAGCACC ATTATGTCGC AAGCTGATAA GATGGTTGAA AGCCATTGTG CCTCCTACTG CTCTTCCATT GTGCTCTACG ATGAGGCGTG GCATCTTGGG GTGTTGGGCA TTGTGGCATC TAAACTTATT GATAAATATT ATTTGCCAAC GGTTGTGTTG GGGGGAATGA ATGGCTTGGT TCGAGGTTCG GTACGAAGCA TTGAAGGGTT GAATATTCAT GCGGTGCTTC AGCACTGTAG CCACCATCTT GAGCAATTTG GTGGACACCA TCAAGCGGCG GGTTTAACGC TCAAGCCTGA AAATCTGGCG GTATTTCGCA AAGCTTTTGA CGAGCAGTGT GCCAATCAGC TTACCATTGA GCAGCGCCAA AAGGTGATGG AAATTGATGC AGTGGTTGAG CTTGAGCAGA TTACCGACAA ATTTATTGCG GTGTTGGAAC AATTTGCCCC TTACGGCATT GGCAACCGTG AACCACTTTT TATGAGTGAA CGGCTGCAAC TTGCTGAGCC TGCTCGACTT TTAAAAGAGC GCCATGTAAA GTTTGCTGTG CGCGATAAGC AAAAGCGCCG TTTTGAGGTG ATAGGCTTTA ACCGCCCCGA TATTTATAAT GATTTACGAG CTGTAAAGCA TCCAACGATT ACCATGCTTT ACACTATTGA GCGCCGCCAA TGGAATGGCA TGTGGCAAGT GCAACTCTTA TTGAAGGATT TGGAGGTGCA GCGCTAA
|
Protein sequence | MKRYRWKCFM PHEETVAALS ESINVSQPIA RALCNRGIST YNEAKEFFRP VLSTLHSPWL FNDMERAVER LVRALKNGET ILLYGDYDVD GTTGVALLLL FLRHHGVEPL WHINDRFAEG YGLSPEGIDR VIASGTTLLI TVDCGIKDHA AIRRCGEHGV EVIVCDHHEA DVTPEAYAIL NPKVVGSGYP FRELCGCAVA FKLVQALAER LGDSEAVWHQ FLDLVAVATA ADLVSLTGEN RTLVIEGLQQ MRSKPRKNFS EMFRVMKVSL GDVRMFHLAF GIAPRINAAG RMHSAHLALE WLLASAPDAV EQHTEALERV NVQRRSLDST IMSQADKMVE SHCASYCSSI VLYDEAWHLG VLGIVASKLI DKYYLPTVVL GGMNGLVRGS VRSIEGLNIH AVLQHCSHHL EQFGGHHQAA GLTLKPENLA VFRKAFDEQC ANQLTIEQRQ KVMEIDAVVE LEQITDKFIA VLEQFAPYGI GNREPLFMSE RLQLAEPARL LKERHVKFAV RDKQKRRFEV IGFNRPDIYN DLRAVKHPTI TMLYTIERRQ WNGMWQVQLL LKDLEVQR
|
| |