| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0580 |
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| Symbol | |
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| ID | 3747527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 684372 |
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| End bp | 686333 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637773114 |
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| Product | putative NADPH-dependent glutamate synthase small subunit |
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| Protein accession | YP_378896 |
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| Protein GI | 78188558 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000307705 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCCA TTTCTCTGAC TATTAATAAT ATCAGCGTAA GCGTTCCGCA AGGCAGTACT
ATTTTGGCGG CGGCTGAAGC TGCTGGCGTT ACCATTCCGA CTCTTTGCTT TTTAAAAGAG
CTTGAGGAGC GTGGCGCTTG CTGGATGTGT ATTGTAGAAA TTAAAGATAA GAACCGTTTT
GTGCCTGCTT GCAATACGGC AGCGGCTGAA GGAATGGTAA TTGAAACTGA AAATCCAACG
CTTAGCGCAA TGCGTCGCCA AAACTTGGAG CGCATTATTG TAGAGCATAG TGGCGACTGC
AATGCCCCGT GCGAACTTGC CTGCCCAGCG GGTTGCAACA TTCCCGATTT TATTGCTGCC
ATTGAGCGTG GCGATAATGC CAAAGCTCTT GAGATTATTA AGGAAGATAT TCCCCTGCCT
GCTATTCTTG GACGCATTTG CCCAGCTCCG TGCGAAGAGG CGTGCCGTCG CCATGGCGTT
GATGAACCGC TCTCAATTTG TGCGCTCAAG CGCTATGCGG CTGACCGTGA TAGCGAGCAA
GCTGAGCGTT ACCTACCACC ATGTGAACCA TCAAGCGGCA AACACGTTGC CATTGTGGGC
GCTGGACCTG CGGGGCTTTC GGCGGCATGG TTTTTACTCC GCAAGGGGCA CAAGGTAACC
ATCTTTGAAG CGGCTCCACA AGCTGGTGGT GTTATGCGTT ACGGCATTCC CCGCTTTCGC
CTTCCTGAAA GCGTTATTGA AAGCGATGTT GCTCCGTTGC TTGCCATGGG CTTGGAACTC
CGTTGCAACA CCCGCTTTGG GCGCGATGTA ACGTTTGATA ATATCCGCAC ACAATACGAT
GCGTTGTTGC TGGCGGCTGG TACTGAAGAG GCGGCAAGCA TGGGCATTGC TGGCGAAGAG
CTTGAGGGCG TTATTAGCGG TATTACTTTT TTGCGCAACG TTGCACTTGG CACCCAATCA
ACACTTGGCA GCAAGGTGAT TGTAACGGGT GGCGGTAACA CCGCAATTGA TGCAGCACGC
ACAGCACTGC GTCTTGGTGC CGAACATGTT ACCATTCTCT ACCGCCGCTC TCGTGCTGAC
ATGCCTGCCA ACGCCTCAGA AATTGGTGAA GCGCTTGCTG AAGGCATTAC CCTTCGCGAA
TGGGCAGCTC CGCTTTCTAT TCACGCCGTT AATGGAGCGC TTGAAATGCA AGCAATTGCC
ATGCAAGCTG GTGAACTTGA TGCATCAGGA CGAAGAAAAC CCGTGCCAAT TGCAGGTTCC
AAATTTACCT TGCAAGCCAA CACCATTATT TCAGCAATTG GGCAACAACT CAATCCCGCA
CTTGCCGAAG CCGCCGCACT TACCACAACA CGCAACGGCT TAGCGGTAAA CCCCGATACT
CTGCAATCCA CAAGCGATGC GTCGCTTTTT GCCTGCGGCG ATTGCGTTAC AGGCTCCGAT
ACCGCTATTC GTGCCGTAGC ACAAGGCAAA CTTGCCGCCC ACAGCATCCA TAGCTACCTC
ACCAATCAAC CCGTTGAAGC CCCAACCCAA CCCTTTAACT CCTCCTATGG CAATCGGGAG
CAAGCCCCCA AAGCTTTTTA TGCCCAAAAA GAGGCAGCAC CGCGCGTTGC TCTGCCCGAA
CTACCACTCA GTGAACGGCA AGGCAATTTT CACGAAGTCG CTATTGGATA CAACAACGAG
CTTGCCCGCA CCGAAGCCGC CCGCTGCCTT CGCTGCAAAT GCAACGCCAT CAACAATTGC
CGCCTACGCG ACCTTGCAAC CCACTATCTC TTTGGCAAGG TTGAACAACA CCCCGAACAT
CTCGGATTTT ATAAAGCCGC AAACAGCGCC ATTAGCATGG AACGCGAAAA ATGTGTTGAT
TGCGGCATTT GCGTTCGCTT GCTTGAAGAG CATAACGGCA ACGTAGAAAT AGCCGTAATG
CGCCAAAGCT GCCCAACAGG AGCGCTCTCA ATGCCTATGT AA
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| Protein sequence | MTSISLTINN ISVSVPQGST ILAAAEAAGV TIPTLCFLKE LEERGACWMC IVEIKDKNRF
VPACNTAAAE GMVIETENPT LSAMRRQNLE RIIVEHSGDC NAPCELACPA GCNIPDFIAA
IERGDNAKAL EIIKEDIPLP AILGRICPAP CEEACRRHGV DEPLSICALK RYAADRDSEQ
AERYLPPCEP SSGKHVAIVG AGPAGLSAAW FLLRKGHKVT IFEAAPQAGG VMRYGIPRFR
LPESVIESDV APLLAMGLEL RCNTRFGRDV TFDNIRTQYD ALLLAAGTEE AASMGIAGEE
LEGVISGITF LRNVALGTQS TLGSKVIVTG GGNTAIDAAR TALRLGAEHV TILYRRSRAD
MPANASEIGE ALAEGITLRE WAAPLSIHAV NGALEMQAIA MQAGELDASG RRKPVPIAGS
KFTLQANTII SAIGQQLNPA LAEAAALTTT RNGLAVNPDT LQSTSDASLF ACGDCVTGSD
TAIRAVAQGK LAAHSIHSYL TNQPVEAPTQ PFNSSYGNRE QAPKAFYAQK EAAPRVALPE
LPLSERQGNF HEVAIGYNNE LARTEAARCL RCKCNAINNC RLRDLATHYL FGKVEQHPEH
LGFYKAANSA ISMEREKCVD CGICVRLLEE HNGNVEIAVM RQSCPTGALS MPM
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