| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0578 |
|---|
| Symbol | |
|---|
| ID | 3747525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 682281 |
|---|
| End bp | 683330 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637773112 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_378894 |
|---|
| Protein GI | 78188556 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4804] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.518293 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAG AACTATCGCA CCGTGCCGAT TATCAAAAGC TGCTTGGCAG TATTTCAACG
CTTTACACGT CGGGGCAGCG CCGTGCCTAT CAAGCCGTTA ACTCCGTTAT TACCGAAACC
TATTGGCAGA TTGGGTGTTA CATGGTGGAG TTTGAACAAT GCGGAAACAT TCGAGCTGAA
TATGGTAAAG CGTTACTTGA CAATTTATCT CGTGATTTAA CGTTGCGCCA TGGCAAAGGA
TTTAGTCGCA GCAACATTAT CCGTTTTAGG CAATTTTATC TTGCTTATCC AAAAGGTGCG
AAGCCTTCGC ACCTTTTGAG CTGGTCGCAT TGGGTTGAAT TATTGAAGCT GGATGATCCT
CTCGAACGCA GTTTTTATGA ACAACAAGCC ATTCGAGAAA AATGGTCAGT TCCTGAACTT
CAACGTCAAA AAAAGTCGTC GCTGTTTCTT CGTTTAGCGG CTGGAAAGGA TAAAGCAGCA
ATTTTGCAAC TTGCAGAGCA AGGGCAAATA GTAGAGCAAC CGGCTGATTT ATTACGCGAT
TCGTTTGTTT TTGAATTCTT AAAAATCCCT GAATCCAGCG AGATGGCTGA GCTTGATCTT
GAAAGTCGCT TGTGCGATCA TCTACAACCC TTTTTGTTGG AGCTTGGCAA AGGCTTTACC
TTTGTTGGGC GGCAATACCG CATTCCTATC AACAATAGCA ATTATCGGGT TGACTTGGTT
TTCTATCACC GTATTTTGCG TTGCTTTGTT TTGATTGATT TAAAAATCAA TGAGGTTGAG
CATCACGATA TTGGGCAAAT GAACCTCTAT CTTGGTTATT TTGCGGCTGA AGAAAATACA
CCCGACGACA ACCCACCAAT AGGCATTATT CTTACTCGTC AAAAAGATGA ATTGCTCGTT
GAGTATGCAA CTTATCAAAT GAACAGTCAG CTTTTTGTTC AAAAGTATCA GCTCTATTTG
CCGGATCGCG AAGAGTTGCG GCGAGAAATT GAGCGCGCGT TGTGGGACAT TGAAGAGAGC
AACAGTAATA AGGAAAAAAA GAACGAATGA
|
|---|
| Protein sequence | MSKELSHRAD YQKLLGSIST LYTSGQRRAY QAVNSVITET YWQIGCYMVE FEQCGNIRAE
YGKALLDNLS RDLTLRHGKG FSRSNIIRFR QFYLAYPKGA KPSHLLSWSH WVELLKLDDP
LERSFYEQQA IREKWSVPEL QRQKKSSLFL RLAAGKDKAA ILQLAEQGQI VEQPADLLRD
SFVFEFLKIP ESSEMAELDL ESRLCDHLQP FLLELGKGFT FVGRQYRIPI NNSNYRVDLV
FYHRILRCFV LIDLKINEVE HHDIGQMNLY LGYFAAEENT PDDNPPIGII LTRQKDELLV
EYATYQMNSQ LFVQKYQLYL PDREELRREI ERALWDIEES NSNKEKKNE
|
|---|
| |