| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0570 |
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| Symbol | rpsA |
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| ID | 3747517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 675279 |
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| End bp | 677057 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637773104 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_378886 |
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| Protein GI | 78188548 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAA CAGTTACACC AGCAGCAGAA AAAAAGGTTA TTGCAAAACC AGGACGCAAA
AAATTTAAAT TTTTTGCCAA CTACGAGCCC GCTGAGCTTG CACGCATGGA GCAGCTTTAC
ACAAGCACGC TTAACGAAAT TACCGAAGAG GAAATTGTTA GAGGGCGTGT TGTTTCTATT
TCCAACAAAG ATGTTACCAT TGATGTTGGC TTTAAATCGG AAGGCATTGT TTCCCTTCTT
GAATTCCGCG ATGATGATGA AGTTCAAGTA GGTGATGATG TTGAGGTTTA TCTTGAAAGC
ATTGAAGACA AAATGGGTCA GCTTATTCTT TCTAAAAAGA AAGCTGACGT ACTAAGAATT
TGGGACAAAA TCTACGATTC AATTGAGAAC GATACCATTA TTAATGGTAA GATTATTAAC
CGCGTTAAAG GCGGCATGAC TGTTTCGCTC TCTGGTGTAG AAGCCTTTCT TCCCGGTTCT
CAAATTGACG TTAAACCAGT GCGCGATTTT GATGCGTTGG TTGGTCAAAC CATGGAGTTC
CGTGTTGTTA AAATCAATCC CGTTACACAA AATATTGTTG TTAGCCACAA AGTTATTCTC
GAAGAGGCTT ATGCCGCTCG TCGCGAAGAG ATGTTGGCAA ACATTAAAGT TGGCATGGTG
CTTGAAGGTA CGGTTAAGAA CATTACCGAC TTCGGTATCT TTGTTGACCT TGGTGGTCTC
GACGGTCTTG TTCACATTAC CGACATTACA TGGGGCAGAA TTAACCATCC ATCAGAAGTG
GTTGAGCTTG ATCAGCCCAT TAAAGTTGTG GTGGTTGGCT TCGACGAAAA CAGCAAGCGC
GTATCGCTTG GCATGAAGCA GCTTGAGTCG CACCCATGGG AAAACATCGA AATTAAATAC
CCTGTTGGCT CAAAAGCACA AGGTCGCGTT GTGTCAATTA CCGACTACGG CGCTTTCGTT
GAAATTGAAA AAGGCATCGA AGGTCTTGTT CACATTTCAG AAATGAGCTG GACGCAGCAC
ATTAAACATC CGGGTCAGTT TGTAACGCTT GGTCAAGAAG TTGAGTGCGT TATTCTCAAT
ATTGATAAAG AGCACACCAA GCTTTCACTC TCCATGAAAC GCGTCAGCGA AGATCCATGG
ATTGCACTTT CTGAAAAATA TATTGAGAAC TCTATCCACA AAGGCACCAT TAGCAACATT
ACCGACTTTG GTGTGTTTGT TGAATTAGAG TCAGGCGTTG ATGGACTTGT TCATATTTCT
GACCTTTCAT GGACAAAGAA AATTCGCCAC CCAAGCGAAT TGGTTAAAAA GAACCAAGAG
CTTGAGGTTA AAGTGTTGAA ATTTGATGTT CACGCTCGCC GTATTGCGCT TGGTCACAAG
CAAATCAACC CAGATCCATG GGGTGAGTTT GAGCAGAAAT ATGCAGTAGG CGCTGAAACC
CCTGGTCAAA TTTCACAAAT CATTGAAAAA GGCGTGATTG TGATTTTACC GGGCGATGTT
GATGGCTTTG TACCTGTATC GCACTTATTG CAAGGTGGAG TAAAAGATAT TCACTCATCA
TTTAAGATTG GTGATGAATT GCCACTTCGC GTCATTGAGT TCGATAAAGA GAACAAGCGC
ATTATTCTTT CAGCTCTTGA ATATTTCAAA GATAAGAGCA AAGAGGAGAT TGAAGCCTAC
TTAGCAGCAC ATCCTAATGA AAAGCAGGAA ATTGAAGCTG CAACGGCTGA GCTTGAGCCA
CCTGTTAAGT CGCACGACAA AAAAGGCGGC GATAAGTAA
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| Protein sequence | MTTTVTPAAE KKVIAKPGRK KFKFFANYEP AELARMEQLY TSTLNEITEE EIVRGRVVSI
SNKDVTIDVG FKSEGIVSLL EFRDDDEVQV GDDVEVYLES IEDKMGQLIL SKKKADVLRI
WDKIYDSIEN DTIINGKIIN RVKGGMTVSL SGVEAFLPGS QIDVKPVRDF DALVGQTMEF
RVVKINPVTQ NIVVSHKVIL EEAYAARREE MLANIKVGMV LEGTVKNITD FGIFVDLGGL
DGLVHITDIT WGRINHPSEV VELDQPIKVV VVGFDENSKR VSLGMKQLES HPWENIEIKY
PVGSKAQGRV VSITDYGAFV EIEKGIEGLV HISEMSWTQH IKHPGQFVTL GQEVECVILN
IDKEHTKLSL SMKRVSEDPW IALSEKYIEN SIHKGTISNI TDFGVFVELE SGVDGLVHIS
DLSWTKKIRH PSELVKKNQE LEVKVLKFDV HARRIALGHK QINPDPWGEF EQKYAVGAET
PGQISQIIEK GVIVILPGDV DGFVPVSHLL QGGVKDIHSS FKIGDELPLR VIEFDKENKR
IILSALEYFK DKSKEEIEAY LAAHPNEKQE IEAATAELEP PVKSHDKKGG DK
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