| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0558 |
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| Symbol | |
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| ID | 3747062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 661582 |
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| End bp | 662664 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637773092 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_378874 |
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| Protein GI | 78188536 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.177986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCAT TTCAGAAATT TCTACCTCGC TATTCCATTG CTCTTGTTGT GCTCTTTAGC
GCAACGGTGC TTTTTTTGCT TACTCGTGCC AATACGGTTG ATGTTGAAGT AGGTGAAGTT
TCCCCATCTG ATTTAGTGCA AGCAATTTAT GCAACAGGTT TTGTGGAAGC CGATACGGTG
GCTGAGCTTC ATACCGAAGC ATCAGGTCGA GTAATTGCCG TAGGTGCATT GGAGGGAGAG
CAGGTTCGTG CTGGGCAAAC CATTGTGCAA CTTGATGCCA CCCGTGCTCA GCTTGCCGTG
CGTGAAGCGC GTGCCGCATT AGCGGAGCAA CAAGCCATAG TGAACGATAA TCGGTTGCGT
TTTGCGCGTC GTCAAGCGCT TTTTCGTGAA GGGGCAATTT CGCGTCAAGA GTTAGAGGAA
TCGGAGCGAA GCCGTTTGCA ATCGGAAGAG TTGTTGCAAC AGCGCCAACT GCAAATTGGC
ATGAAGGCAG AGGAGGCACG CAAAAGCTCC ATTTTAGCTC CATTTTCAGG CACCCTCACC
TTGCAAAGCC TCAAAGTAGG CGATTACGCG CCAGCCAATA CCTTAGTTGC GCAAGTGGTT
GATAGCAATG GTTTTATGGT AGTTGTGGAG GTTGATGAGC TTGATATGCC TCGCTTACGA
GTTGGGCAAG CGGCAACGGT GGCGTTTGAT GCTTTGCCCG ATAAACGCTA TAAAGCGGTG
GTAAGCCGTT TAGTGCCACA CACCGATCGC ATTACAAAAA CTTCGCGCCT TTATTTAACG
CTTCAGGAGT TGCCAGCCTC CATTCAAGAA GGGATGACGG CAACAGCCAA CATTGTCTAT
AATGTTCGCC CACAAGCTTT GTTAGTGCGC AAAAATGCCC TTGTTGATGA GCAGCGCAAA
AGTTACGTAT GGAAAATTGA GAAAGGCGCT TTGAAAAAGG TAGAGGTGGA GCTTGGCGCA
AGCGATATTA GTTTTGTGGA AGTGCTGCGT GGCGTGCGTG CAGGCGATAA GGTGGTGCTC
TCTCCCGCTA AAACTTTACG CGATGGCATG GAGGCAAAAA TTACCTCTAT AAAAAAATTG
TAA
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| Protein sequence | MKSFQKFLPR YSIALVVLFS ATVLFLLTRA NTVDVEVGEV SPSDLVQAIY ATGFVEADTV
AELHTEASGR VIAVGALEGE QVRAGQTIVQ LDATRAQLAV REARAALAEQ QAIVNDNRLR
FARRQALFRE GAISRQELEE SERSRLQSEE LLQQRQLQIG MKAEEARKSS ILAPFSGTLT
LQSLKVGDYA PANTLVAQVV DSNGFMVVVE VDELDMPRLR VGQAATVAFD ALPDKRYKAV
VSRLVPHTDR ITKTSRLYLT LQELPASIQE GMTATANIVY NVRPQALLVR KNALVDEQRK
SYVWKIEKGA LKKVEVELGA SDISFVEVLR GVRAGDKVVL SPAKTLRDGM EAKITSIKKL
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