| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0556 |
|---|
| Symbol | |
|---|
| ID | 3747060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 659396 |
|---|
| End bp | 660430 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637773090 |
|---|
| Product | hydrogenase expression/formation protein HypE |
|---|
| Protein accession | YP_378872 |
|---|
| Protein GI | 78188534 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0309] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATGCC CCACACCAAT TACGCAGCAT GAAACCGTGC AAATGGCGCA TGGCGCTGGT
GGACGTTTGT CAGCCGCATT AATGCAGCGT GTTTTTATGC CCAATTTTCA TAATGCCTTG
CTTGACCAAC TTGACGATCA AGCCAAGCTT GACGTGCCAA TCGGGCGACT TGCTTTTACA
ACCGACACCT ATGTGGTTAG TCCACTCTTT TTTTCGGGTG GTAACATTGG CGAGTTGGCA
GTGAACGGTA CGGTGAACGA TTTGGCGGTG GGTGGTGCAC TGCCGCTTTA CCTGAGTGCG
GGATTTGTGC TGGAAGAGGG ATTGCCTTTA ACCGAGCTGG AGGCTGTGGT TCGCAGCATG
GCTGAGGCTG CCCGACGTGC GGGCGTAACC ATTGTTACGG GCGATACCAA AGTGGTTGGG
CGAGGGCAGT GTGATAAGCT TTTTATCAAC ACTTCAGGCA TTGGCGTAGT GCGTGAAGGT
GTGGAGGTTT CCTGCCGTAA CCTTCAGGTG GGTGATAGCA TTATTCTTTC GGGAAGCGTT
GGCGACCACG GTATGGCAAT TATGAGCACA CGCGAAGGGC TTTCATTTCA ATCACGTATT
GCAAGCGATA CGGCTGCACT CAATGGTATG ATTGCAAAAG TGCTTGATGC GGCGCCAAAG
GCAATTCACG CCATGCGCGA TCCAACGAGA GGTGGGGTTG CTGCAACCTT AAATGAACTT
GCGGGTTCTT CAAACGTAGG AATAGAAATT CATGAAACCG CTATTCCCAT CAAGCCCGAT
GTGCGCGGCG CATGTGAATT ACTTGGCATT GATCCACTGC ATGTTGCTAA CGAAGGGAAA
ATTATTGTGG TGGTTGCTGC CGACCAAGCG GAGCAAGTGC TTGAGGTAAT GCGCTCATGT
AAGCATGGCA GTGATGCAGC TCTTATTGGT TCCGTTGTTG CCGATCATCC AAAAATGGTT
GTAATGCGTA TAGCCTTTGG CAGTCGCCGC ATTCTTGAGC TTCCCGTAGG CGATCAGTTG
CCGAGAATAT GCTGA
|
|---|
| Protein sequence | MQCPTPITQH ETVQMAHGAG GRLSAALMQR VFMPNFHNAL LDQLDDQAKL DVPIGRLAFT
TDTYVVSPLF FSGGNIGELA VNGTVNDLAV GGALPLYLSA GFVLEEGLPL TELEAVVRSM
AEAARRAGVT IVTGDTKVVG RGQCDKLFIN TSGIGVVREG VEVSCRNLQV GDSIILSGSV
GDHGMAIMST REGLSFQSRI ASDTAALNGM IAKVLDAAPK AIHAMRDPTR GGVAATLNEL
AGSSNVGIEI HETAIPIKPD VRGACELLGI DPLHVANEGK IIVVVAADQA EQVLEVMRSC
KHGSDAALIG SVVADHPKMV VMRIAFGSRR ILELPVGDQL PRIC
|
|---|
| |