| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0541 |
|---|
| Symbol | |
|---|
| ID | 3746351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 645430 |
|---|
| End bp | 646104 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637773075 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_378857 |
|---|
| Protein GI | 78188519 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
|---|
| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAA TGGCGCAACA ACCCTCATCT CGCTCTTTTG CGTTGCCGCC GCCTGATGGG
CGCGTAGCAA TGGCGGTTGT TCAGCAACAG ATTGAGGCTA TTGTATTTGC TGCAAATGAG
GTGGTTACGA TAGCAACAAT TCGGCAAGTA ACGGGCTTGC TGCTCCGCCC AGCCGAAATA
AAAAATATGG TGGAGCGCCT TAATGAGGAG TATGAAGCTA CAGGACGTAC TTTTCGCATT
CATGCAATTG CTGGTGGTTA CCGCATGTTA ACCTGCCCTG AATTTAGCGA CCTCCTTCGC
CCATTGAACG CCCCAAAAAC GCGCCGAGCT TTTTCGCGTT CTTTGCTTGA AGTGTTAGCC
GTTATTGCGT ATAACCAACC CGTAACGCGA GCCGATATTC AGCAAGTGCG TGGGGTAAGC
CCCGATTATG CCGTGGAGCG CTTGTTGCAT CACGGGCTTA TTGAGGTGCG TGGACGTGCC
GATGCACCCG GACGACCGCT TCAGTATGGC ACCACTGCGG CATTTCTTGA TATGTTTCAC
CTTTCATCTT TAACCGATTT ACCAAAGCTG CGCGAAATTC GTGAAATTCT TCAAGAGCAA
GAAGAGGAGC GCGAATTGCA GCCATCAAAC AAGAGCAATA ATCCCCTTAA TGTATATGAA
GCAGGAAAAG AGTAA
|
|---|
| Protein sequence | MRKMAQQPSS RSFALPPPDG RVAMAVVQQQ IEAIVFAANE VVTIATIRQV TGLLLRPAEI
KNMVERLNEE YEATGRTFRI HAIAGGYRML TCPEFSDLLR PLNAPKTRRA FSRSLLEVLA
VIAYNQPVTR ADIQQVRGVS PDYAVERLLH HGLIEVRGRA DAPGRPLQYG TTAAFLDMFH
LSSLTDLPKL REIREILQEQ EEERELQPSN KSNNPLNVYE AGKE
|
|---|
| |