| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0525 |
|---|
| Symbol | |
|---|
| ID | 3746335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 612287 |
|---|
| End bp | 613780 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637773059 |
|---|
| Product | amidophosphoribosyl transferase |
|---|
| Protein accession | YP_378841 |
|---|
| Protein GI | 78188503 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
|---|
| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0994274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGAG TTTTCGGCAT TTATAACTCT AAAACTCCCG CGGAAGATGC CTTTTACGGC
TTATACTCGC TCCAGCATCG CGGGCAAGAA GCGGCGGGTA TTGTGGTAGC GGAGTATAAC
AAGGTGAAGA AAAAGACGAT CTTTAAACAG CATAAAGGCA TGGGGCTTGT GTCGGAGGTG
TTTAAAGATG AATCGGTTTT TCAAAAGTTA AGCGGTTATG CGGCAATTGG TCATAATCGC
TATTCAACAA CGGGTTCTTC TTCTGCTGTT AGCAACATCC AGCCTTTTTC CCTCATTTAT
CGCTCTGGCA GCCTTGCCAT TGCTCACAAC GGCAATCTCA CCAACTCCCG CACGTTACGG
CGTGAACTCA CTGAGTTAGG CGTTATTTTT CAAGCCTCAT CCGACACTGA AATTGTGCCT
CATTTAGCGG CTCGTAGCCG TGAGCAAGAG CCTGTATTGC AAATTCGTGA TGCGCTTTCG
CAAGTGCAGG GTGCTTACTC AATAGTATTG CTTGCCAATA ATCAATTGAT TGCAGCGCGT
GATCCCTTTG GTTTTCGCCC ACTTGCGCTT GGCAAAAAAG TTGATCCGTT GACGGGCGAA
CTTGCCTATG TGGTTGCCAG TGAAACCTGC GCTTTCGATA TTATTCAAGC GCAATACATT
CGCGATATTG AGCCGGGTGA AATTCTTTTA ATTGACCATT TAGCGGTAGC CAACGAGCAA
CCGACCTCCT ATTTTTTGCC TACTACCACC AACAAGGCGC GTTGCATTTT TGAGTATGTC
TATTTTTCGC GCCCCGATAG CTTTATTTTT GGGCAATCGG TGGATAAGGT GCGGCGTAAC
TTGGGTAAAA ATCTTGCATA CGAATCAACA ATTCGCCAAG AAGCGGATGA AAAAGAGTTG
ACGGTGGTAA GTGTGCCTGA TTCTTCGAAC ACTGCGGCGC TTGGCTTTGT GCGTGAAAGC
ATCAAATTAG GGCGTCCTGC ACGTTTTGAG CATGGTTTAA TTCGCAATCA CTATGTGGGT
AGAACTTTTA TTCAGCCCGG TGTGCAAAGC CGCGATATTA AGGTGCGCTC AAAGTATAAT
ATTGTGCGAG GGGTGCTGCT TAATCGTCCC ATTATTTTAA TAGATGACTC CATTGTGCGA
GGTACCACAG CACGAATGCT TATTAAGCTT ATTCGTGAAG CTGGTCCAAA AGCAATTCAT
TTGCACATAA GTTCACCACC TATTACCAAT CCATGTTTTT ATGGGATGGA TTTTCCCTCA
AAGCGGCAGC TTTTAACTCA TTTATTTGAA ACAAATGAGG CTGGGGAGCA AGAGATTGAT
AAAATTCGCG ACTACATTGG GGTTGATTCG TTAAAATATC TTTCTATGGA AGGGTTGCTC
AATAGCGTGC CAAAATTTGA GGGGGAAACA TGTAGCTATT GCACAGCTTG CTTTACGGGC
GTTTATCCCA TTAAAGAGCA TGATATGACT GCCGATAAGG ATGAAAACGA TTAA
|
|---|
| Protein sequence | MCGVFGIYNS KTPAEDAFYG LYSLQHRGQE AAGIVVAEYN KVKKKTIFKQ HKGMGLVSEV
FKDESVFQKL SGYAAIGHNR YSTTGSSSAV SNIQPFSLIY RSGSLAIAHN GNLTNSRTLR
RELTELGVIF QASSDTEIVP HLAARSREQE PVLQIRDALS QVQGAYSIVL LANNQLIAAR
DPFGFRPLAL GKKVDPLTGE LAYVVASETC AFDIIQAQYI RDIEPGEILL IDHLAVANEQ
PTSYFLPTTT NKARCIFEYV YFSRPDSFIF GQSVDKVRRN LGKNLAYEST IRQEADEKEL
TVVSVPDSSN TAALGFVRES IKLGRPARFE HGLIRNHYVG RTFIQPGVQS RDIKVRSKYN
IVRGVLLNRP IILIDDSIVR GTTARMLIKL IREAGPKAIH LHISSPPITN PCFYGMDFPS
KRQLLTHLFE TNEAGEQEID KIRDYIGVDS LKYLSMEGLL NSVPKFEGET CSYCTACFTG
VYPIKEHDMT ADKDEND
|
|---|
| |