Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0513 |
Symbol | |
ID | 3747846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 599333 |
End bp | 600208 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637773047 |
Product | putative DNA-binding protein |
Protein accession | YP_378829 |
Protein GI | 78188491 |
COG category | [R] General function prediction only |
COG ID | [COG3943] Virulence protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.63298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCATGG ACGGAACTAA GAATGAAATA GTATTATATC AATCCAACGA GCTTACTTCA CACATCGAAG TAAAAGTTGA GGATGATACT GTTTGGTTGA ATCGTCAACA AATAGCAACT CTTTTTGGAA GAGATGTTAA AACGATTGGC AAGCATATCA ATAATGTGTT TCTGGAAAAT GAGCTTAACA AGAGCTCAAC TGTCGCAAAT TTTGCGACAG TTCAAAATGA AGGCGGCAGA GTGGTTGAGC GTCAAGTTGA ATATTACAAC CTTGACGTTA TTATTTCAGT TGGGTATCGG GTAAAATCGA AGCAAGGCAC TCAGTTTAGG ATTTGGGCAA ATCAAGTCTT AAAAGATTAT TTACTCAAAG GTTATGTTTT AAACCAACGG ATGAACTGTA TTGAAAATAG CGTAGAAAAT CTTGCCTGTA AAGTAAAAGA AATTGAGCTG CAAATCACAT CGAACGCTAT TCCTAATCAA GGCGTTTTCT TTGATGGTCA AGTGTTTGAT GCCTACGAAT TAGCTTCTCG AATTATCCGT TCGGCAAAAC AAAGCATTGT GCTTATTGAT AATTACATTG ATGAAAGCAC ATTAACGCAT TTAACTAAAA AGGAAAAAGG GGTACGTGTA CTGTTGCTTA CTAAAAACAT CACGAAACAG CTTGCGTTAG ATGTGCAAAA AGCCAACGAA CAATATGGAA ATTTTGAACT TAAGTCGTTT GCAAAGAGCC ATGATCGTTT TTTAATTATT GATACTAATG AGGTGTATCA CATAGGTGCT TCGCTTAAAG ATTTAGGCAA AAAATGGTTT GCTTTTTCTC AAATGGATAA AAGCTCTGTG AGCACTATTC TTACTTCAAT TGATACGATG CTATAA
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Protein sequence | MCMDGTKNEI VLYQSNELTS HIEVKVEDDT VWLNRQQIAT LFGRDVKTIG KHINNVFLEN ELNKSSTVAN FATVQNEGGR VVERQVEYYN LDVIISVGYR VKSKQGTQFR IWANQVLKDY LLKGYVLNQR MNCIENSVEN LACKVKEIEL QITSNAIPNQ GVFFDGQVFD AYELASRIIR SAKQSIVLID NYIDESTLTH LTKKEKGVRV LLLTKNITKQ LALDVQKANE QYGNFELKSF AKSHDRFLII DTNEVYHIGA SLKDLGKKWF AFSQMDKSSV STILTSIDTM L
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