| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0497 |
|---|
| Symbol | tpiA |
|---|
| ID | 3746366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 580210 |
|---|
| End bp | 580968 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637773031 |
|---|
| Product | triosephosphate isomerase |
|---|
| Protein accession | YP_378813 |
|---|
| Protein GI | 78188475 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAAA AAATTGTTGT TGGCAATTGG AAAATGAATA ACGGTGTTGC CGCTTCCGAG
CAACTTGCCG CCGATCTTCT TGCCGCGTTA GGCAGCAGCT TTACTGGCTG TGATGTTGGT
ATTGCGCCTA CCTTTCTTTC CCTTACAACG GCTGGTAAAG TAATTGCTGG CTCAACTATT
CAGCTTGTAG CGCAAAATTG CCATTATGAA AATGATGGTG CTTATACGGG CGAAGTTTCC
GCAGCAATGC TGAAAGGAGC AGGATGTAGC TCAGTTATTA TTGGGCATTC AGAACGCCGC
CAATTTTTTG GCGAAACCAA TGCCACCGTT AACCTGCGTG TAAAAAAAGC GTTAGCCGAA
GGGCTTGATG TTATTTTGTG TGTTGGCGAA ACCTTAGCCG AGCGCGAAAG CGGTGTTACC
GGCGATATTG TGTCAGCGCA AGTACGTGAA GGATTAGTTG GTGTAAGCGA TATCAGTAAC
GTGGTAATTG CTTATGAGCC AGTGTGGGCA ATTGGTACCG GTAAAACAGC AACTTCCGCA
CAAGCCGAAG AGGTGCACTT GATGATTCGC ACCTTAGTAA CGGAGCTTTA TGGCGAGCCA
GCCGCACAAG CTTTGCGCAT TCAGTATGGC GGTAGTGTAA AGCCCTCCAA TGCGGTTGAG
CTTTTCGCTA TGCCAAATAT TGATGGTGGC TTAATTGGTG GAGCCAGCTT AAATGCTGCC
GATTTTGTGG CTATTGTGCA GGCAGCAGCA GGGAAGTAA
|
|---|
| Protein sequence | MRKKIVVGNW KMNNGVAASE QLAADLLAAL GSSFTGCDVG IAPTFLSLTT AGKVIAGSTI
QLVAQNCHYE NDGAYTGEVS AAMLKGAGCS SVIIGHSERR QFFGETNATV NLRVKKALAE
GLDVILCVGE TLAERESGVT GDIVSAQVRE GLVGVSDISN VVIAYEPVWA IGTGKTATSA
QAEEVHLMIR TLVTELYGEP AAQALRIQYG GSVKPSNAVE LFAMPNIDGG LIGGASLNAA
DFVAIVQAAA GK
|
|---|
| |