| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0485 |
|---|
| Symbol | |
|---|
| ID | 3746354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 564249 |
|---|
| End bp | 565466 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637773019 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_378801 |
|---|
| Protein GI | 78188463 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000025501 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTG GTAGTCCTGC AACAGGGAAT GACTTTTTTG GACGTGAACA AGAGCTAAGA
GACCTTTGGC GTTACTTGGA AAGCGATCAC ATTCGTTTTC CCGGGGTGCG TCGTCTTGGT
AAAACTTCCA TTCTGAAACG ATTGGAAGCT GATGCCGCTG AACATGGGCT TTTAGCCAAA
TGGGTAGATG TTTCCAACAT TGATTCAGCG AAAGGCTTTG TTGCGCTGTT AGAGCAAGCG
TTTCCTGAAA ACACCATCAA GCGTTTTCTC TCTGATAAGA CCAAACAGGT TGCTGACTGG
TTCAAGATTA TTCGTAAAGT TGAGGTTACT TTGCCTGACG AGGCTGGTGG TGGAGGGTTT
GGTATTGAAT TGGGTGAAGT GTTGCTGGAA TGGCAACATG CCGCCAATCA TCTGCACCAT
CGTCTCAGCA ATCAGCCTTT GTTGATACTG CTTGACGAGT TTCCTGTGAT GCTTGAAAAG
CTCATTCAGC GAAATCGTCA AGAAGCTGAG CAACTGCTTA CTTGGTTGCG TATTTGGCGT
CAGTCGCAAG GTGCTTGTCG TTTTGTCTTT ACTGGTTCTA TTGGCTTACA ATCTTTGCTC
GAACGGCATC GGCTTGGTGA AACCATGAAC GATTGCTTTG CTTATCCTCT CGGACCATAC
AAACCATCGG AAGCTCGTGA CTTGTGGAAA TATTTTGCAC AGAACGCTGA CGAAAACACT
TGGCAAGTTA CGGATTTGGT GATTGACCAT GCTCTTAGCC GCGTTGGTTG GCTGTCGCCA
TATTTTCTAT GTCTATTACT TGATGAAAGT ATTCGTGCAG CGCGAGAGCG ACAAGAAGAG
TGGCCAAGCA AAGCAAGTGG TGCAGCTTCT ATTGAAGTTG AGGATGTTGA TGATGCGTAT
GAACAATTGC TTGCTGAACG TTCTCGTTTT CACCATTGGG AAAAACGTCT CAAGGATGCT
TTAGCGCCTG CTGAGTTGGA TTTTTGCCTG AGCTTGCTTA CCCATCTTTC TCGAAAACCT
GAAGGACTTA CCCTGAATCA GTTAAGTAGC CGTCTTGCTA AACGTGAGCC TGATCCTGAT
TGTCGCGCTC AACGCATACA AGAGCTTTTG GTGCGTTTGA CCGATGAAGG TTATACCAGT
TCTCCCGATA GCAACAAGCG TGTGCAGTTT CTCTCATTTC CGTTACGCGA TTGGTGGAAT
CGTAATCATG TTAGATAA
|
|---|
| Protein sequence | MKLGSPATGN DFFGREQELR DLWRYLESDH IRFPGVRRLG KTSILKRLEA DAAEHGLLAK
WVDVSNIDSA KGFVALLEQA FPENTIKRFL SDKTKQVADW FKIIRKVEVT LPDEAGGGGF
GIELGEVLLE WQHAANHLHH RLSNQPLLIL LDEFPVMLEK LIQRNRQEAE QLLTWLRIWR
QSQGACRFVF TGSIGLQSLL ERHRLGETMN DCFAYPLGPY KPSEARDLWK YFAQNADENT
WQVTDLVIDH ALSRVGWLSP YFLCLLLDES IRAARERQEE WPSKASGAAS IEVEDVDDAY
EQLLAERSRF HHWEKRLKDA LAPAELDFCL SLLTHLSRKP EGLTLNQLSS RLAKREPDPD
CRAQRIQELL VRLTDEGYTS SPDSNKRVQF LSFPLRDWWN RNHVR
|
|---|
| |