| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0478 |
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| Symbol | |
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| ID | 3748203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 558290 |
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| End bp | 559168 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637773012 |
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| Product | VpsC protein |
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| Protein accession | YP_378794 |
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| Protein GI | 78188456 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.238955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACC CGAACGCTTT AAAATGGAGC GACTTAAAAA CTGGTATTTT TTTCATTCTT
GGTATGGGCT TTGCTGCTTA TCTCGGTTTA GTAATTAGTA AAAATAGTAG CTTGTTTTCG
GGCGTTACCA CCGTTAAAAT ACGATCAAGC GATATTCAAA GTTTAGCCGA AAACAACTTT
GTATCGGTGT CGGGCAAAAA AATTGGCACC GTTTCAAAAA TGGAGTTTGT TAAAAGTAAC
GACTCACTCT TTGTGGTGGC AAGCTTGCGT TTGCGCAACG AATATGCCCC CTTGGTAACT
AAAGATGCGC GAGCCACTAT TAAGTCGCTT GGTGTTTTGG GGGATAAGTT TGTTGATATT
AAAACCGGCA AAGGAGCACC TGTAAATGAG GGTGATTTTC TTGCGCTTGA TACCGATGAA
GGTATGGCAA GCTTAACCAC CAATGCCAGC AATGCTTTTG TAAAAATCAA CCAATTGCTT
GACCAACTCA ACAGCGGCAA GGGTATGGCT GGACGCATTA TTTCGGATGA GCAAATGGGC
AAAGAGCTTG CTGAAACCGT TACGGGCTTA AAAACGGCAA CCAACGAATT AGCCCAACTT
ACCGCAAAGG CTTCGCGTGG CAACGGCTTG CTTCCCAAGC TTTTAAACGA CCCCGCAATG
GCTAAAAATA CGGAAGAGAC GCTGGAGCAC CTCAATCAAA CCTCCCGCAA AACAGAATTA
CTTCTTACCA AGCTGAATGA CGATAAAGGC ACCTTAGCGC AACTCTCCAG CAATCCTGCG
CTTTACAACA ACCTCAATCA AGCCGTCTCT TCGCTTGATT CGCTCTTGAC TGATTTAAAA
GCTCACCCAA GCCGCTACGT TAAATTCTCA GTTTTTTAA
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| Protein sequence | MKNPNALKWS DLKTGIFFIL GMGFAAYLGL VISKNSSLFS GVTTVKIRSS DIQSLAENNF
VSVSGKKIGT VSKMEFVKSN DSLFVVASLR LRNEYAPLVT KDARATIKSL GVLGDKFVDI
KTGKGAPVNE GDFLALDTDE GMASLTTNAS NAFVKINQLL DQLNSGKGMA GRIISDEQMG
KELAETVTGL KTATNELAQL TAKASRGNGL LPKLLNDPAM AKNTEETLEH LNQTSRKTEL
LLTKLNDDKG TLAQLSSNPA LYNNLNQAVS SLDSLLTDLK AHPSRYVKFS VF
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