| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0449 |
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| Symbol | |
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| ID | 3747374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 526796 |
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| End bp | 528280 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637772982 |
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| Product | L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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| Protein accession | YP_378765 |
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| Protein GI | 78188427 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCGA ATCGAATACC TTGTGCTATC TCTTTACTCA TTCTTTATTT TGAATCGAAC
TACTTCTCCA TGAGCTTTTT TTACTTCATT GGCATTGGCG GCACCGCTAT GGCATCCGTA
GCCGTTGCAC TTTCTCGCGC AGGGCACTAC GTTATAGGCT CCGATACGCA ACTCTATCCT
CCCATGAGCA CCTTTCTTGA GGAGCATGGA ATTTCCTATT GCCATGGATT TGCTGAGGAG
AATCTTCGCT CGTTTTCGCC CGATGCCGTT GTGGTTGGAA ATGCTATTAG CCGAGGGAAT
CCCGAACTTG AATATGCGTT GGAGCAGCAT CTTGAACTGC TTGCAATGCC CGACTTAGTG
CGTCGCCATC TTATTGCCAA CAATACCTCC GTTGTGGTTG CGGGCACTCA TGGCAAAACC
ACAACCACCT CGCTTGTTGC GTGGATGCTT GAAGCGGGTG GCTTGCAACC CGGCTTTTTG
ATTGGCGGTA TCCCTGAAAA CTTTGGTCTT GGCTGCCGAC CATCAGCAGG CGAAGGTGCA
GGATTTTTTG TAACAGAAGG CGATGAGTAC GACACCGCTT TTTTTGACAA GCGTAGCAAG
TTCCTGCTTT ACCGCCCCGA CATTGCCATT ATTAATAATG TGGAATTTGA CCACGCCGAT
ATTTTTAACT CGCTTGAAGA TATTAAGCGC AGCTTTCGCT TGTTTGTTAA CCTCATCCCC
CGCAACGGCT TACTCTTAGT GAATGGCGAC GACCCCGTTG CTCTTGAATG TGCCGAAAAA
GCCTTCTGCC CTGTTGAGCG CTTTGCCCTC CATGCAAACG CAGAATGGAG CGCCACCAAC
ATCCATAGTG AAGAGGAGGG CTCATCATTT GAGCTACTCC ATCACGGCAA AAGCGTTGGA
ACATTCCATG TGCCACTCTT TGGCAACTAC AACATTATGA ACGCGATTGC CGCACTTGCC
GCCGCTTACC GCTGTGGTGT GTCGTTTGAG GCGCTTGCCG ATGGATTGCC GCACTTTCAG
CGTCCCAAAC GGCGCATGGA GCTGCTTGGC GAATTTGCCG ATGGCATCAC CTTAATTGAG
GATTTTGCCC ACCATCCCAC CGCTATTCGA GTAACGCTTG AAGCCATAGC CCAACGCTAC
AATGGGCGCC GCATTGTTGC TTGCTTTGAG CCACGCTCCA ACACCACAAC ACGCAATATT
TTTCAAGAGG AACTTGCAAG CTGCTTTGCA CCAGCATCCG TTGTAGTGCT TGGCAAAGTG
CATCGCCCAG AGCGTTATGG CGACCATGCG CTCAACACGG CTCTCTTACA AGAGCAATTG
CAAAGCGCAG GCAAAGAGGT TTTTCTTGCG GGAAATGATG CCGATTATCC TGCCGACATT
ATTCGCTATC TTGAAGCGCA CCGCCGTCAT GGTGATGTTG TGGTGCTACT CAGCAACGGC
AGTTTTGGCA ATTTGAAACA AATGGTGATG GAGCGGTGGA GGTAA
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| Protein sequence | MTSNRIPCAI SLLILYFESN YFSMSFFYFI GIGGTAMASV AVALSRAGHY VIGSDTQLYP
PMSTFLEEHG ISYCHGFAEE NLRSFSPDAV VVGNAISRGN PELEYALEQH LELLAMPDLV
RRHLIANNTS VVVAGTHGKT TTTSLVAWML EAGGLQPGFL IGGIPENFGL GCRPSAGEGA
GFFVTEGDEY DTAFFDKRSK FLLYRPDIAI INNVEFDHAD IFNSLEDIKR SFRLFVNLIP
RNGLLLVNGD DPVALECAEK AFCPVERFAL HANAEWSATN IHSEEEGSSF ELLHHGKSVG
TFHVPLFGNY NIMNAIAALA AAYRCGVSFE ALADGLPHFQ RPKRRMELLG EFADGITLIE
DFAHHPTAIR VTLEAIAQRY NGRRIVACFE PRSNTTTRNI FQEELASCFA PASVVVLGKV
HRPERYGDHA LNTALLQEQL QSAGKEVFLA GNDADYPADI IRYLEAHRRH GDVVVLLSNG
SFGNLKQMVM ERWR
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