Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0408 |
Symbol | |
ID | 3747788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 479958 |
End bp | 480935 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637772938 |
Product | sodium/bile acid symporter family protein |
Protein accession | YP_378724 |
Protein GI | 78188386 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0798] Arsenite efflux pump ACR3 and related permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGGAAAA TGCTTGGGTG GCTTCAGAAA CATTTAATTT GGAGTATTCC ATTAGCAATG GTGGCTGGAT TGCTGTTTGG AAGTGTAACG GTACCAACGT TGTTGCGGAT GGCTATTTTG CCGTTAACCT TTCTTATGGT TTATCCTATG ATGGTAACCA TGAATGTGCG CGATTTATTA AAAGCGGGCG ATAATACGTT GCAGGGTATT ACGTTAGCTA TTAATTTTTT GTTGATGCCT GCTATTGGTT ATGGGATGGG ATTACTTTTT TTCCCCCATG AACCAATGAT TCGTTTGGCG TTGTTGCTTA CTTCGCTGTT GCCTACATCG GGGATGACTA TTTCGTGGAC TGGTTTTGCA AAAGGCAATA TTGCTTCGGC TATAAAAATG ACGGTACTTG GTTTAATTGC AGGTTCTTTG TTAGCGCCGC TCTATTTGAA AATTTTGCTG GGTGCTGTGG TTGAAATTCC TTTACTACAA GTATTTTTAC AAATTGGATT AATTGTTTTT CTCCCGCTTG TGTTGGGTAC TCTTACACGC AATTGGATAA TTAAACGCTA CGGTTCCGAA AAATATAATC AACAGATTAA ACCTAAGTTT CCTCCATTTT CAACAATTGG GGTTCTTGGG ATTGTTTTTG TTTCTATGGC ATTAAAAGCA AAAAGCATTA TTGCGCATCC TGTGGTGTTA CCTAATTTGT TGATGCCATT GGTTGTTATT TATGCTATAA ACTTTATGCT CAGCACGTTG GTGGGCAAGC TCTTTTTTCA ACGTAATGAT GCCATTGCGC TTGTGTATGG CACGGTAATG CGGAACCTTT CCATTGCCTT AGCAATTGCT ATGGGAGTTT TTGGTGAAAA GGGTACCGAT GCGGCGCTTT TAATTGCGTT AGCCTACATT GTGCAAGTGC AAGCGGCGGC GTGGTATGTA AAGTTTACCG ATCGTTTGTT TGGTGCGGCT CAACATGCTC ATGCGTAG
|
Protein sequence | MWKMLGWLQK HLIWSIPLAM VAGLLFGSVT VPTLLRMAIL PLTFLMVYPM MVTMNVRDLL KAGDNTLQGI TLAINFLLMP AIGYGMGLLF FPHEPMIRLA LLLTSLLPTS GMTISWTGFA KGNIASAIKM TVLGLIAGSL LAPLYLKILL GAVVEIPLLQ VFLQIGLIVF LPLVLGTLTR NWIIKRYGSE KYNQQIKPKF PPFSTIGVLG IVFVSMALKA KSIIAHPVVL PNLLMPLVVI YAINFMLSTL VGKLFFQRND AIALVYGTVM RNLSIALAIA MGVFGEKGTD AALLIALAYI VQVQAAAWYV KFTDRLFGAA QHAHA
|
| |