Gene Cag_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_0397 
Symbol 
ID3747565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp462279 
End bp462707 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content48% 
IMG OID637772925 
Productprotein tyrosine phosphatase 
Protein accessionYP_378713 
Protein GI78188375 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID[TIGR02691] arsenate reductase (thioredoxin) 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.14 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCACCT CCATTCTCAT TCTCTGTACC AGCAACTCCT GCCGAAGCCA AATGGCTGAA 
GGATTTCTCC GTTCATTCAA CAAATCACTT GAGGTCTATT CCGCAGGCAC CAAACCAACC
GAAGCAGTGC ATCCACTTGC CATAAAAGTG ATGCACGAAG AGTGGATTGA TTTAAGCCGC
AACAAGCCAA AAAGCGTGGA TGAATTTCTT AACAAGCCAT TCGATTACGT TATCACCGTA
TGCGATGGCG CAAAAGAATC ATGCCCTATA TTTAGCGGGC AAGTAAAGCA TCGCCTCCAC
ATCAGTTTTG ACGATCCCGC CGAAGCCATC GGCACACAAG CCGAGCAACT TGCCGTTTTT
CGCCGCGTGC GCGATGACAT CAATCAACGC TTTCGGCAGT TCTATAACGA ACATATATCA
GGGAAGTAG
 
Protein sequence
MLTSILILCT SNSCRSQMAE GFLRSFNKSL EVYSAGTKPT EAVHPLAIKV MHEEWIDLSR 
NKPKSVDEFL NKPFDYVITV CDGAKESCPI FSGQVKHRLH ISFDDPAEAI GTQAEQLAVF
RRVRDDINQR FRQFYNEHIS GK