Gene Cag_0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_0394 
Symbol 
ID3747562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp459410 
End bp459955 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content45% 
IMG OID637772922 
Productcytochrome b6-f complex, iron-sulfur subunit 
Protein accessionYP_378710 
Protein GI78188372 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.582739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAAC AGGGTAATTT TAAGAATCCC GCCCGTCTTA GTGCACTTGG GGATGGTGCA 
TCTGCCTCAT CATCTGGTAC TGTTGCTGGC GGTAAACCGC GCGGCGATGG TTTGAGCGGT
ATTAATTTTG AGCGTCGTAG TTTTCTTGGT AAAGTAGTTG CAGGTGCAGG TGCAGCCGTA
GCCGCAACCA CGCTTTATCC CATTGTAAAG TACATTGTTC CCCCAACAAA AGTAGTTGTT
GAAGAGAATG AGAAGGTAGT GGGTAAAGCC TCTGAGGTTC CCGAAAAAAC CGGCAAAATT
TATCAGTTCA ATAAAGATAA GGTTATTGTT ATTAATGATA ACGGCAAACT CACTGCATGT
AGCGCTATTT GTACCCATCT TGGTTGCTTA GTAAGCTGGA AAGCAGGAGA GAACCTTATT
TTCTGCCCTT GCCACGGCGC AAAATACAAA CAGACCGGTG AAATTATTTC GGGTCCGCAA
CCACGTCCTT TAACCATTTA CAAGGTTCGT GTGGAAGGTG AAGACCTTAT TATCTCAAAA
GCTTAA
 
Protein sequence
MAQQGNFKNP ARLSALGDGA SASSSGTVAG GKPRGDGLSG INFERRSFLG KVVAGAGAAV 
AATTLYPIVK YIVPPTKVVV EENEKVVGKA SEVPEKTGKI YQFNKDKVIV INDNGKLTAC
SAICTHLGCL VSWKAGENLI FCPCHGAKYK QTGEIISGPQ PRPLTIYKVR VEGEDLIISK
A