| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0390 |
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| Symbol | thyX |
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| ID | 3747558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 453033 |
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| End bp | 453701 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637772918 |
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| Product | FAD-dependent thymidylate synthase |
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| Protein accession | YP_378706 |
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| Protein GI | 78188368 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1351] Predicted alternative thymidylate synthase |
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| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00258676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGTTC GCCTTATTGC TACTACCACT CCAGCCATTC AAATTGAAGG GCAAACACCC
ACGCCTGAAG GGTTAATGGC TTACTGTGCA CGAGTTTCAA GCCCGAATCA AGAGTCGCTT
GATTATGAAA AGCTGCTTGC TTACTGCATT CGTAACAAGC ATTGGAGCGT TTTTGAAATG
GTTGATATGA CGGTTGAAAT AGTTACCTCA CGAGCAATTT CACCCCAAAT ATTAAGGCAC
AAGAGCTTTC AATTTCAGGA ATTCAGTCAA AGATACGCCA AAGTGCAGGA GGTTGAGCGT
TATGAGCCAC GCCGTCAAGA CAGCAAAAAT CGCCAAAATT CTATTGACGA TTTAGATGAA
TCGGTAAAGG TGTGGTTTAT GGAGGCGCAA GAGGAGATTG CTAACAACGC GATGGAGTAC
TACAACATGG CGCTTGAAAA AGGCATTGCA AAAGAGTGTG CTCGTGTGCT ACTGCCGCTT
GCAACCCAAA CCCGTTTATA CATGAAAGGT TCAGTGCGGA GTTGGATTCA CTACTTGGAG
GTTCGTACAA GCAGCAGCAC ACAAATGGAG CATCGTGAAA TAGCGCTCGC TATTCAACGC
CTTTTTATGG AGCAATTTCC CATTACTGCT TCAGCGTTGG GGTGGAAGTC GGCAGCTCCG
TGCCCGTAA
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| Protein sequence | MNVRLIATTT PAIQIEGQTP TPEGLMAYCA RVSSPNQESL DYEKLLAYCI RNKHWSVFEM
VDMTVEIVTS RAISPQILRH KSFQFQEFSQ RYAKVQEVER YEPRRQDSKN RQNSIDDLDE
SVKVWFMEAQ EEIANNAMEY YNMALEKGIA KECARVLLPL ATQTRLYMKG SVRSWIHYLE
VRTSSSTQME HREIALAIQR LFMEQFPITA SALGWKSAAP CP
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