| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0387 |
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| Symbol | |
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| ID | 3747555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 448296 |
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| End bp | 449195 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637772915 |
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| Product | RNA polymerase sigma factor rpoD (sigma-A) |
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| Protein accession | YP_378703 |
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| Protein GI | 78188365 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCAAC TAAAAATCAG TAAACAAATA ACCAATCGCG AAAGCCTCTC TCTCGACCGC
TATTTGCAAG AGATTGGTAA ATATGATCTG CTCACTGCCG AAGATGAGGT GCGCCTTACC
AAAGCCATTA AAGAGGGCTT TGATATGCCG GTTGACACCC CCGAATACAA GCGGGCAAAA
CGCGCACTTG ATAAGCTTAT TAAAGGCAAT CTTCGCTTTG TGGTTTCGGT AGCTAAGCAA
TACCAAAACC AAGGGTTAAC GCTTGGCGAC CTTATTAATG AAGGGAATCT TGGACTTATT
AAAGCCGCAA AACGCTTTGA TGAAACACGC GGCTTTAAAT TTATTTCCTA CGCTGTGTGG
TGGATTCGCC AATCCATTTT GCAAGCTCTT GCTGAGCAAT CGCGCATTGT GCGCTTGCCA
CTGAACCGCG TTGGTACGCT GAACAAAATC AGCAAAGCAT ATAGCCAACT TGAGCAAGAG
TACGAGCGCG ATCCCAACAC ACGCGAACTT GCAAGCTTGC TTGAAATGGA TTCGCAAGAT
GTTGCCGACA CGCTTAAAAT TGCCGGACGC CATGTGTCGG TTGATGCACC CTTTGCGCAA
GGCGACGACA ACCGCTTGCT TGACGTGTTG CAAAATGATG GACATATGCC CGATTACGGC
TTAACCCGCG ATTCTCTAAC GCTTGAAGTT GAACGTTCAC TTTCGGTGCT CGCTCCCCGC
GAAGCCGATG TTATTCGCTC TTACTTTGGC ATTGGTATGG ATAATCCGCT AACGTTGGAG
GAGATTGGCG AAAAATTCCG TTTAACCCGT GAACGTGTTC GCCAAATTAA AGAAAAGGCT
ATTCGGCGGT TACGCCAATC GGCATATAGC AAAGTGCTCA AAGAGTATAT TGGCGGATAA
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| Protein sequence | MRQLKISKQI TNRESLSLDR YLQEIGKYDL LTAEDEVRLT KAIKEGFDMP VDTPEYKRAK
RALDKLIKGN LRFVVSVAKQ YQNQGLTLGD LINEGNLGLI KAAKRFDETR GFKFISYAVW
WIRQSILQAL AEQSRIVRLP LNRVGTLNKI SKAYSQLEQE YERDPNTREL ASLLEMDSQD
VADTLKIAGR HVSVDAPFAQ GDDNRLLDVL QNDGHMPDYG LTRDSLTLEV ERSLSVLAPR
EADVIRSYFG IGMDNPLTLE EIGEKFRLTR ERVRQIKEKA IRRLRQSAYS KVLKEYIGG
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