| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0369 |
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| Symbol | alaS |
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| ID | 3748014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 424216 |
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| End bp | 426876 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637772897 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_378685 |
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| Protein GI | 78188347 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.134799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCGC ATGAAATAAG GCAATCCTTT CTCGATTTTT TTGCTCAAAA AGGGCATACC
ATTGTGCGTT CAGCACCTGT AATTCCGGCT GATGATCCTA CCTTGTTATT TACCAATGCT
GGTATGAACC AGTTTAAGGA TGTCTTTCTT GATAAGGGTA GTCGCCCCTA CGTGAGAGCG
GCTGATACGC AAAAGTGCAT TCGTGCATCG GGTAAGCATA ACGATTTAGA GGATGTTGGG
CGCGATACCT ATCATCACAC TTTTTTTGAA ATGCTGGGTA ATTGGTCGTT TGGCGACTAT
TACAAGCTTG AAGCTATTAC ATGGGCGTGG GAGCTGTTTA CTGTGGTGTG GAAGCTACCA
AAAGAGCGCT TGTATGCTAC GGTGTATCAG GATGATGACG AGAGTTTTCA AATTTGGAAA
GAGCAGACGG ATATTAATCC TGACCATATT TTGCGCTTTG GTGATAAGGA TAATTTTTGG
GAGATGGGGG AAACAGGTCC TTGCGGTCCC TGTTCCGAGA TTCATATTGA TTTAACGCCC
GATGGTTCGG GTAAGGAGTT GGTAAACGTT GGTGATTACC GTGTTATTGA GTTGTGGAAC
CTTGTGTTTA TTCAATACAA TCGTCAAAGT GATGGGCACC TTGAGCCGCT GCCGAAAAAG
CATGTGGACA CGGGCATGGG CTTTGAGCGC ATTGTTGCGG TGATGCAGGG CAAGGGTTCT
AACTACGATA GCGATGTATT CCAGCCGCTC TTTGATAAAA TTACCGAGAT TACCGGTGTG
CGTTATGGTG CTTCGCTTGA TGCCCCCAAC GACATTGCTA TGCGTGTGAT TGCTGACCAT
GCTCGCACGC TTACCTTTGC GCTTTCCGAT GGTGCCATGC CATCCAACGA AGGGCGAGGC
TATGTGCTGC GCCGCATTTT GCGCCGTGCG CTTCGCTACT CCCGCAATCT TGGCTATCAC
CAACCAATTC TCCATCAATT AGTTGGCACA CTTGCGCTTG CCATGGGTGA AGTATTCCCT
GAATTAGTGC AGCGCCAAGA GGCGGTAAGC GCTATTATTA AAGCTGAAGA GGAGAGCTTT
ATTGTAACTC TTGATCGCGG TATTGATCTC TTTAGCGAGT TAGTTGAAAA GCTTCGTGCT
TCAAATGGCA AAGTTATTGC TGGTAGCGAT GCGTTCCGCT TGTACGATAC CTATGGGTTC
CCTTTTGATT TAACGCGCTT AATGGCGGCT GACGAGGGAT TTGAGGTTGA TGGCGAAGGT
TTTGAACATT GTATGCAGGA GCAGAAAAAC CGTGCCCGAA GCGATCGCCG TGAAAAGCAG
CGCGTTGATG ACGATGGTGC TAAATGGCAG TGGTTTAGCG ATGTTCGCGC ATCACAATTT
GTAGGGTACG ATCACCTTGT GCACAGTGCA ACCATAACGG GCATTCGCCA AGGCAATGGC
AAGTTGTTGC TTGTGTTAGA TGCCACACCT TTTTACGCTG AAAGCGGTGG TCAAACGGGC
GACAATGGAT GGCTTGAAAA TAGCCGTTAC CGCTTGCATG TTGCCGATAC CGTTAAAGAT
GGCGATGCTA TTGTTCATGT GGTCAGCGAT GCGTTTGATA AAGTGCAAGA TTCGGCTGTG
CAGCCTGAGG ATGTGGAAAT TGTTGAGCAA GAGCTTGCTG TTGCAGCTTC CGTTCATCGC
ACGGCGCGTC AAGATGCTGA GCGGAACCAC ACGGCAACGC ACTTAATGCA CGCCGCATTG
CGCCGCATTC TTGGTGAGCA TGTGCAGCAA AAAGGCTCCT TTGTAAGCCC AGAGCGCCTT
CGCTTTGACT TTAGCCATTT TTCAAAGCTG ACGGATGAAG AAATTGAAGC CGTTGAAATT
GCGGTGAACA CCCAAATTCG TGAAGCCGAG CCGGTGGTTA AACATGCCGA TGTTCTTTTC
GATGATGCTG TAGCAAAAGG GGCGCTTGCC TTTTTTGGCG ATAAATATGC CGATCGTGTT
CGTGTTGTAG AAATACCCGG CATGTCGGTT GAGTTGTGCG GAGGTACCCA TGTTGATAAC
ATTGGGCGCA TTGGGCTTTT TAAAATTATT AGTGAAGCCT CCGTTGCTTC GGGCGTGCGC
CGCATTGAAG CCGTTACGGG TAAAGCTGCT GAAAAACTTC TCTGGCAAGA ATACCGTGAA
CTTCAACAAA TTCGGCAATT GCTTAAAGCT AAGGGTGATG AAGCGGTTGT TGAAAAAGTT
GCAGGCTTGA TGGATTCCAA GAAAGAGCTT GAAAAAGAGC TTGCAGAAAG CCGTGCAGCA
GCGTTAGTTG AGCAGCTTAC GGCTGCATTG CAAGCAGCGC CTGAAGTAAG TGGCTGCCGA
GTGTTGGCAA TAGAGGTAAA AAATAACGAT GGTGAAACGA TGCGCCAAGC CACAATGGCA
TTGCGCGATA AAGCGCCGTG CGCCGTTGGA TTGCTTGCTA CCGTTGAAGC AGGAAAAGTG
GTGTTAGTAA GCTTTGCAAC CGATGAAGCT GTACGCACCT GTTCGCTTGA TGCAGGAGCG
CTTATTCGTG AAGCCGCCAA GCAAGTGCAA GGTGGAGGCG GAGGTAAAGC GGAATTTGCA
ACGGCTGGAG GCAAACAGCC CGAAAACCTC AGCAAAGCGC TTGACGCTTT TACGGCTGCG
GTTCGTGCTA AACTTGGATA A
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| Protein sequence | MKSHEIRQSF LDFFAQKGHT IVRSAPVIPA DDPTLLFTNA GMNQFKDVFL DKGSRPYVRA
ADTQKCIRAS GKHNDLEDVG RDTYHHTFFE MLGNWSFGDY YKLEAITWAW ELFTVVWKLP
KERLYATVYQ DDDESFQIWK EQTDINPDHI LRFGDKDNFW EMGETGPCGP CSEIHIDLTP
DGSGKELVNV GDYRVIELWN LVFIQYNRQS DGHLEPLPKK HVDTGMGFER IVAVMQGKGS
NYDSDVFQPL FDKITEITGV RYGASLDAPN DIAMRVIADH ARTLTFALSD GAMPSNEGRG
YVLRRILRRA LRYSRNLGYH QPILHQLVGT LALAMGEVFP ELVQRQEAVS AIIKAEEESF
IVTLDRGIDL FSELVEKLRA SNGKVIAGSD AFRLYDTYGF PFDLTRLMAA DEGFEVDGEG
FEHCMQEQKN RARSDRREKQ RVDDDGAKWQ WFSDVRASQF VGYDHLVHSA TITGIRQGNG
KLLLVLDATP FYAESGGQTG DNGWLENSRY RLHVADTVKD GDAIVHVVSD AFDKVQDSAV
QPEDVEIVEQ ELAVAASVHR TARQDAERNH TATHLMHAAL RRILGEHVQQ KGSFVSPERL
RFDFSHFSKL TDEEIEAVEI AVNTQIREAE PVVKHADVLF DDAVAKGALA FFGDKYADRV
RVVEIPGMSV ELCGGTHVDN IGRIGLFKII SEASVASGVR RIEAVTGKAA EKLLWQEYRE
LQQIRQLLKA KGDEAVVEKV AGLMDSKKEL EKELAESRAA ALVEQLTAAL QAAPEVSGCR
VLAIEVKNND GETMRQATMA LRDKAPCAVG LLATVEAGKV VLVSFATDEA VRTCSLDAGA
LIREAAKQVQ GGGGGKAEFA TAGGKQPENL SKALDAFTAA VRAKLG
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