Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0369 |
Symbol | alaS |
ID | 3748014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 424216 |
End bp | 426876 |
Gene Length | 2661 bp |
Protein Length | 886 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637772897 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_378685 |
Protein GI | 78188347 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.134799 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATCGC ATGAAATAAG GCAATCCTTT CTCGATTTTT TTGCTCAAAA AGGGCATACC ATTGTGCGTT CAGCACCTGT AATTCCGGCT GATGATCCTA CCTTGTTATT TACCAATGCT GGTATGAACC AGTTTAAGGA TGTCTTTCTT GATAAGGGTA GTCGCCCCTA CGTGAGAGCG GCTGATACGC AAAAGTGCAT TCGTGCATCG GGTAAGCATA ACGATTTAGA GGATGTTGGG CGCGATACCT ATCATCACAC TTTTTTTGAA ATGCTGGGTA ATTGGTCGTT TGGCGACTAT TACAAGCTTG AAGCTATTAC ATGGGCGTGG GAGCTGTTTA CTGTGGTGTG GAAGCTACCA AAAGAGCGCT TGTATGCTAC GGTGTATCAG GATGATGACG AGAGTTTTCA AATTTGGAAA GAGCAGACGG ATATTAATCC TGACCATATT TTGCGCTTTG GTGATAAGGA TAATTTTTGG GAGATGGGGG AAACAGGTCC TTGCGGTCCC TGTTCCGAGA TTCATATTGA TTTAACGCCC GATGGTTCGG GTAAGGAGTT GGTAAACGTT GGTGATTACC GTGTTATTGA GTTGTGGAAC CTTGTGTTTA TTCAATACAA TCGTCAAAGT GATGGGCACC TTGAGCCGCT GCCGAAAAAG CATGTGGACA CGGGCATGGG CTTTGAGCGC ATTGTTGCGG TGATGCAGGG CAAGGGTTCT AACTACGATA GCGATGTATT CCAGCCGCTC TTTGATAAAA TTACCGAGAT TACCGGTGTG CGTTATGGTG CTTCGCTTGA TGCCCCCAAC GACATTGCTA TGCGTGTGAT TGCTGACCAT GCTCGCACGC TTACCTTTGC GCTTTCCGAT GGTGCCATGC CATCCAACGA AGGGCGAGGC TATGTGCTGC GCCGCATTTT GCGCCGTGCG CTTCGCTACT CCCGCAATCT TGGCTATCAC CAACCAATTC TCCATCAATT AGTTGGCACA CTTGCGCTTG CCATGGGTGA AGTATTCCCT GAATTAGTGC AGCGCCAAGA GGCGGTAAGC GCTATTATTA AAGCTGAAGA GGAGAGCTTT ATTGTAACTC TTGATCGCGG TATTGATCTC TTTAGCGAGT TAGTTGAAAA GCTTCGTGCT TCAAATGGCA AAGTTATTGC TGGTAGCGAT GCGTTCCGCT TGTACGATAC CTATGGGTTC CCTTTTGATT TAACGCGCTT AATGGCGGCT GACGAGGGAT TTGAGGTTGA TGGCGAAGGT TTTGAACATT GTATGCAGGA GCAGAAAAAC CGTGCCCGAA GCGATCGCCG TGAAAAGCAG CGCGTTGATG ACGATGGTGC TAAATGGCAG TGGTTTAGCG ATGTTCGCGC ATCACAATTT GTAGGGTACG ATCACCTTGT GCACAGTGCA ACCATAACGG GCATTCGCCA AGGCAATGGC AAGTTGTTGC TTGTGTTAGA TGCCACACCT TTTTACGCTG AAAGCGGTGG TCAAACGGGC GACAATGGAT GGCTTGAAAA TAGCCGTTAC CGCTTGCATG TTGCCGATAC CGTTAAAGAT GGCGATGCTA TTGTTCATGT GGTCAGCGAT GCGTTTGATA AAGTGCAAGA TTCGGCTGTG CAGCCTGAGG ATGTGGAAAT TGTTGAGCAA GAGCTTGCTG TTGCAGCTTC CGTTCATCGC ACGGCGCGTC AAGATGCTGA GCGGAACCAC ACGGCAACGC ACTTAATGCA CGCCGCATTG CGCCGCATTC TTGGTGAGCA TGTGCAGCAA AAAGGCTCCT TTGTAAGCCC AGAGCGCCTT CGCTTTGACT TTAGCCATTT TTCAAAGCTG ACGGATGAAG AAATTGAAGC CGTTGAAATT GCGGTGAACA CCCAAATTCG TGAAGCCGAG CCGGTGGTTA AACATGCCGA TGTTCTTTTC GATGATGCTG TAGCAAAAGG GGCGCTTGCC TTTTTTGGCG ATAAATATGC CGATCGTGTT CGTGTTGTAG AAATACCCGG CATGTCGGTT GAGTTGTGCG GAGGTACCCA TGTTGATAAC ATTGGGCGCA TTGGGCTTTT TAAAATTATT AGTGAAGCCT CCGTTGCTTC GGGCGTGCGC CGCATTGAAG CCGTTACGGG TAAAGCTGCT GAAAAACTTC TCTGGCAAGA ATACCGTGAA CTTCAACAAA TTCGGCAATT GCTTAAAGCT AAGGGTGATG AAGCGGTTGT TGAAAAAGTT GCAGGCTTGA TGGATTCCAA GAAAGAGCTT GAAAAAGAGC TTGCAGAAAG CCGTGCAGCA GCGTTAGTTG AGCAGCTTAC GGCTGCATTG CAAGCAGCGC CTGAAGTAAG TGGCTGCCGA GTGTTGGCAA TAGAGGTAAA AAATAACGAT GGTGAAACGA TGCGCCAAGC CACAATGGCA TTGCGCGATA AAGCGCCGTG CGCCGTTGGA TTGCTTGCTA CCGTTGAAGC AGGAAAAGTG GTGTTAGTAA GCTTTGCAAC CGATGAAGCT GTACGCACCT GTTCGCTTGA TGCAGGAGCG CTTATTCGTG AAGCCGCCAA GCAAGTGCAA GGTGGAGGCG GAGGTAAAGC GGAATTTGCA ACGGCTGGAG GCAAACAGCC CGAAAACCTC AGCAAAGCGC TTGACGCTTT TACGGCTGCG GTTCGTGCTA AACTTGGATA A
|
Protein sequence | MKSHEIRQSF LDFFAQKGHT IVRSAPVIPA DDPTLLFTNA GMNQFKDVFL DKGSRPYVRA ADTQKCIRAS GKHNDLEDVG RDTYHHTFFE MLGNWSFGDY YKLEAITWAW ELFTVVWKLP KERLYATVYQ DDDESFQIWK EQTDINPDHI LRFGDKDNFW EMGETGPCGP CSEIHIDLTP DGSGKELVNV GDYRVIELWN LVFIQYNRQS DGHLEPLPKK HVDTGMGFER IVAVMQGKGS NYDSDVFQPL FDKITEITGV RYGASLDAPN DIAMRVIADH ARTLTFALSD GAMPSNEGRG YVLRRILRRA LRYSRNLGYH QPILHQLVGT LALAMGEVFP ELVQRQEAVS AIIKAEEESF IVTLDRGIDL FSELVEKLRA SNGKVIAGSD AFRLYDTYGF PFDLTRLMAA DEGFEVDGEG FEHCMQEQKN RARSDRREKQ RVDDDGAKWQ WFSDVRASQF VGYDHLVHSA TITGIRQGNG KLLLVLDATP FYAESGGQTG DNGWLENSRY RLHVADTVKD GDAIVHVVSD AFDKVQDSAV QPEDVEIVEQ ELAVAASVHR TARQDAERNH TATHLMHAAL RRILGEHVQQ KGSFVSPERL RFDFSHFSKL TDEEIEAVEI AVNTQIREAE PVVKHADVLF DDAVAKGALA FFGDKYADRV RVVEIPGMSV ELCGGTHVDN IGRIGLFKII SEASVASGVR RIEAVTGKAA EKLLWQEYRE LQQIRQLLKA KGDEAVVEKV AGLMDSKKEL EKELAESRAA ALVEQLTAAL QAAPEVSGCR VLAIEVKNND GETMRQATMA LRDKAPCAVG LLATVEAGKV VLVSFATDEA VRTCSLDAGA LIREAAKQVQ GGGGGKAEFA TAGGKQPENL SKALDAFTAA VRAKLG
|
| |