Gene Cag_0344 details

Gene Information

• Locus tag: Cag_0344
• ID: 3748027
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 390381
• End bp: 391085
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637772872
• Product: photosystem P840 reaction center iron-sulfur protein
• Protein accession: YP_378660
• Protein GI: 78188322

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.105113
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGACC CTGTAGAAAA AACAGCGACC CCAGCAGCAC CTGCTGCAAA AGCATCCCCG 
GCAGCTCCTA AAGCTGCTGC GCCAAAGGCT GGTGCACCGG CTGCTAAAGA GGGCAAGCCA 
AAGCCAAAGG AGAGTCCAAA AGATAAAAGT GGCAAACCAC GATTTGAGCC TTTAAATATT 
AATCTTGGTC GTACTGGATT GCCGCAAGAG TCGGCTTTGC CTATTAAAAA AGCTGCCCCA 
AAACCAGCAC CTGCCGCCGC TGGTGCGAAG CCAGCTCCCG GTGCAAAGCC TGTACCTGGT 
GCTAAACCTG CGGCTCCTGC CGCAAAAGCC GCACCAGCTT CACCGAGTGC TGCCCCAGCA 
GGTGGTCAGG TTGTGAAAAA AGCGGCTCCA AAACCAAAAG CTCACTACTT TATTATTGAA 
AATCTTTGTG TGGGATGTGG CTTGTGTCTT GATAAATGCC CACCAAAAGT GAATGCTATT 
GGTTACAAGT TTTATGGTGA TGTGCAAGAG GGTGGTTTCC GTTGCTACAT TGATCAAGAT 
GCTTGTATTT CGTGTTCGGC ATGTTTTTCA ACTGATGAAT GCCCAAGTGG TGCGCTTATT 
GAGGTGCAAC CTGATGGTGA GGTGCTTGAT TTTACTTATA CGCCTCCCGA TCGTTTGGAT 
TTCGATTTAC GCTTTTTGCA TCGCTTTCAT CGCGAGGTGC GTTAA 

 

Protein sequence

MADPVEKTAT PAAPAAKASP AAPKAAAPKA GAPAAKEGKP KPKESPKDKS GKPRFEPLNI 
NLGRTGLPQE SALPIKKAAP KPAPAAAGAK PAPGAKPVPG AKPAAPAAKA APASPSAAPA 
GGQVVKKAAP KPKAHYFIIE NLCVGCGLCL DKCPPKVNAI GYKFYGDVQE GGFRCYIDQD 
ACISCSACFS TDECPSGALI EVQPDGEVLD FTYTPPDRLD FDLRFLHRFH REVR