| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0341 |
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| Symbol | |
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| ID | 3748061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 384212 |
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| End bp | 386470 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637772868 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_378657 |
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| Protein GI | 78188319 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.132358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAA GGAATCTTGT GCTGTTTACA CTGATGGCAG TTTCAGCGGA GGGCTATGCT
GCTGGTACTA AGGCCAAATC TATTGTAAAA ACACCCTCCG CAGCAACACA AGCAGCCGAA
ACGATGCAAG CGTTGCCATT AGATCGCCAA ACAGCGTTAA ATTTAGCACA GAGTTACCTT
GCTAATGGAT CAAGCAGGCA AGCTGAGCTT ATTTTAAGCA AGCTTGTACT ACTTTACCCT
GACGATGAAG AAATTTTAAG AGAAACTATA TCGCTTTACG AAAAAAGTAA TAGAGCAGAG
CAAACTCTAC CTCTCTACCA GCATTTGTTA CAGCTACGAC CAAATGATTT AGAGCTAACA
CTTGCAAGTG CAAGAGCCTA TTCATGGACA GGAAGAAAAG CTGAATCAAT AGCTCTGTAC
GAAAAAGTAC TCAAAGCAGG TAATGCCTCC GAAAAAGTTG TAACTGAATA TGCTGATTTT
TTATATGCAG ATAAGCAATA CCAAAAAGCT ATTGATCTCT ATAAAAGCGT TGGACAAAAG
GGTAAGCTAA GTAAGCAGCA TATGCTTAAT ACGGTGAATG GTTTTATTGC ATTAAAAAAG
TTTGATGAGG CAGCTAAAAT TTGTAATGCA AATGTTCCCC TTTACCCTCA GGATACCGAC
TTTTTAAGAT TAGCGGCTGA TATCAATTTT AATGCAAAGC AGTTTGAAGA GGCAGCAGGT
CATTATCGCC AGTTATTGCT TAAGAATCCA GACGATCCGG GTGCCTATAG CAAACTTGCA
GATATTGCAA TGGCGAAAAA TGATTTCACT GAAGTTGCTC GCCTAAGCCA TAAAATTTTA
GCCTTGATTC CTGATCACAA AACAGCAATG CTTTCTTTAG CGAGAGTTTC AAGCTGGCAA
GGCGATTTTA CAACTTCGTT AACTTATTAC GATAAACTTA TTGCCTCTCC CAACCCTGAG
CCTTTTTATT ATCGGGAAAA AGCACGAGTT TTAGGATGGA TGGGGGATTT TAAACAAGCT
TTAAGTGTTT ATAAAAGCGC TGTTCAAAAA TGGCCTGACG ATAAAGCAAT AAGCGCTGAG
GCTGAAGCCA AGAAAAATTA TTATAACCAC ACCTATCGCC CTGCTGTTAA AGCATATAAT
GCTTGGCTCT TAGCAGAACC GCAACAACCC GAAGCTCTGT TTGATCTTGC TCAGCTTTAT
GCGCAATATG GAAAATGGAA TAATGGGTTA AACACCTACA ACTCACTTTT AAGTCAAATA
CCTGCTCATC GTCAAGCTGC ACTTGCTAAG CAAAAAATTG ATTTTGCGGC ATCAAGAATG
TTTGTGCGTA GTGGTGTAGA ATATTTTAGT GCAAAAACAA AGTTTATTGA TGCTACAAAT
CATAGGCAAG CTGATACAAA AAGCACTTCA ATCTATTCTT CGCTTACATA TCCAATAAAT
GAGCGAGTGT CTGCTTTTGT AAATCTTGAT AGCAAGTCAT ACGATTTTCG TATTGCTAAG
CCAAATACTC CAAAAAATCC TGTTACTTAT GGCTTGATGG CAGGTGCAGA ATATCGCAAT
ATGCCGAATA TTGCACTCAG TGCTGGATTG GGTATGCGTA TGAATCCCGG TGATGTAGAT
AATGGTCTCA CTGGTTTTAT TAATGCGAAT AGTCAGCCCG TTGATAACCT TCATGTTGGA
GTAACGTTGC GCAATGATGA TATTGTAACC AACACCTCTT CATTTAATAA TCAACTTGAA
GCCACGCGTC TGCAAGGACG AGTTGCTTAC AATGGATATC GCCGTTGGCA AGCTGGTATG
GATATTGCTT TTGATAGCTA TGCAGACAAC CAATCTTACG ATAATAGTAG CCTAACAGTT
GGTGCTGATG TTGTAGCCCA CTTGCTATAC GAACCACAAC GTTTAAGTGT ATCGTACCGT
TTACAAGAAT ATGGTTTTGA TAAGAACCAT GCGAATCATC CACAATACTA CAACTATTTT
TGGACGCCTA AATCATATAC AACACATACG TTTGGGCTTG AATGGCAACA TTACCTTAAT
AGAGAGCGTT TCCATGGTTC TAATAACACA TACTATGATA TTGCTTTCCG TGTTGGACTT
GAACAAGAGG GTGATATTTC ACGCCAAATC CATGCAAGCA TTAACCACGA CTGGAATAGC
CGTCTTGCCA CATCGTTAGA GGGGCAATAT ACATGGGGAA CAAGTGCTGA AATTTATCAG
GACAGCATGG TCAAAGCTGA GTTCCGCTGG TTTTTATAA
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| Protein sequence | MKVRNLVLFT LMAVSAEGYA AGTKAKSIVK TPSAATQAAE TMQALPLDRQ TALNLAQSYL
ANGSSRQAEL ILSKLVLLYP DDEEILRETI SLYEKSNRAE QTLPLYQHLL QLRPNDLELT
LASARAYSWT GRKAESIALY EKVLKAGNAS EKVVTEYADF LYADKQYQKA IDLYKSVGQK
GKLSKQHMLN TVNGFIALKK FDEAAKICNA NVPLYPQDTD FLRLAADINF NAKQFEEAAG
HYRQLLLKNP DDPGAYSKLA DIAMAKNDFT EVARLSHKIL ALIPDHKTAM LSLARVSSWQ
GDFTTSLTYY DKLIASPNPE PFYYREKARV LGWMGDFKQA LSVYKSAVQK WPDDKAISAE
AEAKKNYYNH TYRPAVKAYN AWLLAEPQQP EALFDLAQLY AQYGKWNNGL NTYNSLLSQI
PAHRQAALAK QKIDFAASRM FVRSGVEYFS AKTKFIDATN HRQADTKSTS IYSSLTYPIN
ERVSAFVNLD SKSYDFRIAK PNTPKNPVTY GLMAGAEYRN MPNIALSAGL GMRMNPGDVD
NGLTGFINAN SQPVDNLHVG VTLRNDDIVT NTSSFNNQLE ATRLQGRVAY NGYRRWQAGM
DIAFDSYADN QSYDNSSLTV GADVVAHLLY EPQRLSVSYR LQEYGFDKNH ANHPQYYNYF
WTPKSYTTHT FGLEWQHYLN RERFHGSNNT YYDIAFRVGL EQEGDISRQI HASINHDWNS
RLATSLEGQY TWGTSAEIYQ DSMVKAEFRW FL
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