Gene Cag_0338 details

Gene Information

• Locus tag: Cag_0338
• Symbol: sucC
• ID: 3748058
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: -
• Start bp: 379999
• End bp: 381171
• Gene Length: 1173 bp
• Protein Length: 390 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637772865
• Product: succinyl-CoA synthetase subunit beta
• Protein accession: YP_378654
• Protein GI: 78188316
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.210616
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATTC ATGAATATCA AGGCAAGGAT ATCCTCAGAA AATTTGGGGT TACCGTGCCA 
AAAGGCATTG TGGCTTATTC GGCTGATGAA GCAAAGCAAG CAGCAGAGCA ACTTTTTGCT 
GAAACGGGTT CTTCCGTTGT GGTTGTAAAA GCACAAATCC ACGCAGGTGG ACGGGGTAAA 
GCGGGTGGTG TTAAACTTGC AAAATCACCT GAAGAGGCAT TTGAAATTGC TCGCCAAATG 
ATTGGCATGA CGCTTATTAC GCATCAAACC GGTCCTGAAG GTAAAGTGGT AAGTCGGCTG 
CTTATTGAAG AGGGCATGGG AATTGAAAAA GAATTTTACG TTGGCATCAC GCTTGATCGT 
GCTACCTCAC GCAATGTGTT GATGGTATCA ACGGAAGGTG GTATGGAAAT TGAAACCGTT 
GCCGAAGAAA CACCTGAAAA GCTCCTAAAA ATTCAAATTG ACCCGCTTTT CGGCATGCAA 
GGCTTTCAAG CTCGCGAAGC CGCATTTTTC CTTGGGCTTG AGGGTGAACA GTTCCGCAAT 
GCCGTAAATT TTATTACAGC TCTTTATAAA GCTTACACCT CAATTGATGC CTCAGTGGCT 
GAAATTAATC CTTTAGTGGT TACTTCTGAA GGCAAGGTGA TTGCTTTGGA CGCAAAGATT 
AATTTTGATG ATAACGCCCT CTATCGCCAT AAAGAGTACA TGGAATTGCG CGACACCAGC 
GAGGAAGATC CATTTGAAGT TGAAGCTTCA AAGTCTAACT TGAACTATGT GCGCCTTGAT 
GGTAATGTGG GCTGCATGGT GAATGGCGCT GGCTTAGCAA TGGGCACGAT GGATATTATT 
CAGCTTGCTG GTGGTAAACC TGCAAACTTT CTTGATGTTG GTGGCACAGC AAGTCCTCAA 
ACCGTAGAAG AAGGCTTTAA GATTATTTTA AGCGATAAAA ATGTTCGTGC TATTTTAGTG 
AACATTTTTG GAGGCATTGT ACGCTGCGAC CGTGTAGCTG GAGGTATTAT GGAAGCTGCC 
AAGAAAATGG ATTTACACTT GCCCGTTATT GTGCGCCTTG AGGGCACAAA TGCGTCCATT 
GCACAGCAAA TGCTTGATGA ATCGGGCTTA AGCTTAATTG CGGCTAAGGG GTTGCGTGAT 
GCAGCTCAAA AGGTGCAAGA AGCATTAGCT TAA 

 

Protein sequence

MNIHEYQGKD ILRKFGVTVP KGIVAYSADE AKQAAEQLFA ETGSSVVVVK AQIHAGGRGK 
AGGVKLAKSP EEAFEIARQM IGMTLITHQT GPEGKVVSRL LIEEGMGIEK EFYVGITLDR 
ATSRNVLMVS TEGGMEIETV AEETPEKLLK IQIDPLFGMQ GFQAREAAFF LGLEGEQFRN 
AVNFITALYK AYTSIDASVA EINPLVVTSE GKVIALDAKI NFDDNALYRH KEYMELRDTS 
EEDPFEVEAS KSNLNYVRLD GNVGCMVNGA GLAMGTMDII QLAGGKPANF LDVGGTASPQ 
TVEEGFKIIL SDKNVRAILV NIFGGIVRCD RVAGGIMEAA KKMDLHLPVI VRLEGTNASI 
AQQMLDESGL SLIAAKGLRD AAQKVQEALA