Gene Cag_0337 details

Gene Information

• Locus tag: Cag_0337
• ID: 3748057
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 377945
• End bp: 379918
• Gene Length: 1974 bp
• Protein Length: 657 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637772864
• Product: ATPase
• Protein accession: YP_378653
• Protein GI: 78188315
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.498916
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGCTT TGCTTGAATT AGTTGATGTG CAGCGCAGCT ACACCATTGG TGAAAGCGAA 
GTTGCTGCAT TGCGTGGCGT GTCGCTCACT ATTGAACGTG GCGAATTTGT CGCCATTATG 
GGAGCATCGG GTTCTGGAAA ATCGTCGCTC TTGCACATTC TTGGCTTACT CGATACTCCC 
GATAAGGGGA GTTATCGTAT TGCAGGTAGC GACGTTGCCA CACTTTCCGA TGATGCTCGT 
GCAAGTTTGC GTAACCATGT GGCTGGATTT GTGTTCCAGC AATTCCATCT GCTTCGCCGC 
ATGAGTATTG AGGATAATGT GCGCCTTCCC ATGCTTTATA GCGGCGTGGA GCGTTCGAGT 
AATCTTCAAG CAGAAGCCAT CCGTCGGCTT GAAATGGTGG GATTGGCGCA TCGCTTGCAT 
CATACGCCAT CGCAACTTTC AGGTGGTGAA CAGCAACGGG TTGCTATTGC TCGCGCACTC 
ATTCGCCAAC CAGCCATTAT TTTTGCTGAC GAACCAACAG GTAACCTTGA TACGCGCAAT 
TCCCTTGAGA TTATGAAGAT TTTGCAAGGG TTGCACGAGG AGGGCAAAAC CATCGTCATG 
GTAACGCATG AGCCCGACAT TGCAGCCTAT GCCGATCGCA TTATCACCAT GCGTGACGGG 
GTTATTATCA GTGATGAGCG CAAAGCCACC GCTACCGTTT TACCATCATC CGATAGTCCT 
TTTGTACTGC CAACCACAGC TATAGCCGCA TGGTGGCACT ACAAGCGCTT GTCGGGCTTT 
GTAGCACAAG CCATGCAAGC AATTCTTGCC AACAAAATGC GCTCCTTGCT CTCCATGTTG 
GGCATTTTAG TTGGTGTGGC TTCCGTTATT GCTATGATGG CACTTGGCGA AGGGGCACGG 
GTTGCTATGC AGGAAGAGCT TAAAGCTATG GGTTCCAACA TGCTCTCGGT GCGAGGTGGC 
TCAGCTAAAA TTCGAGGCAC TTCGCAAGGT GCTGGTGCGG TAACGCGCTT TACGGTAAAA 
GATGTAGAGG CAATTGCCGC CTTACGTCCA TTAGTGCGCA ATGCAAGCGG TGTTGTTAAT 
GGCTCGGCAC GGGTGGTGTA TGGCAACCGC AATTGGAGTA GTTCACTGCT TGGTGCTGGT 
TACGATTATG GTACCATGCG TGCAGCTTTG CCAACGGTAG GGCGCTGGTT TACGGCTGAG 
GAATTGCAAC GGCGCGACAA GGTGGCAATT ATTGGCGTAA CGGTAGCTCG TGAGCTGTTT 
GGAGAGAGTA ATCCGCTTGG TAAAACCATT AAAATTAACC GCATTAACTT TACGGTGATA 
GGGTTAGCGC CTGCCAAAGG TTTTGTTGGT CCGCAAGATG AGGATGATAT TGTGATGATT 
CCTCTCTCAA CGGCTATGTA TCGGGTTCTT GGGCGCGATT ATTTAAGCGG TATTTTTGTT 
GAGGTAGCTG AAGCGCATCG CGTTGACGAA GCTCGCCAAC GTATTGCAGC GTTTATTCGC 
CAGCGACACC GTCTGCCTGT TGATGACGAC TCTTTTTACA TTCGTGATAT GACGGAAATT 
CAAAAAATGT TAAGCAGCAC CACGCGCACC ATGAGCTTGC TGCTTGGAGC CATTGCAGCA 
ATTTCTCTGG TAGTTGGCGG CATTGGGATT ATGAACATTA TGTTAGTATC GGTTACCGAG 
CGAACCCGTG AAATTGGTTT ACGTAAAGCA CTTGGTGCTC GCAACAGCGA TATTATGCTT 
CAATTTTTAG TGGAATCAGC CGGTATGACG CTACTTGGCG GTGTTCTTGG CTTATTGGTG 
GGAATTGGTG TGGCGTTGGG GCTAACGCTT GTCGCGGGAT GGGCTGTAAA AATTTCGCTC 
TTTTCGGTGC TATTGGCTAC CCTCTTTTCA GCCGTTACAG GGCTTTTTTT TGGATTATGG 
CCTGCTCAAA AAGCAGCAGC GTTAAAGCCG GTAGAGGCGT TGCGCTACGA ATAA 

 

Protein sequence

MSALLELVDV QRSYTIGESE VAALRGVSLT IERGEFVAIM GASGSGKSSL LHILGLLDTP 
DKGSYRIAGS DVATLSDDAR ASLRNHVAGF VFQQFHLLRR MSIEDNVRLP MLYSGVERSS 
NLQAEAIRRL EMVGLAHRLH HTPSQLSGGE QQRVAIARAL IRQPAIIFAD EPTGNLDTRN 
SLEIMKILQG LHEEGKTIVM VTHEPDIAAY ADRIITMRDG VIISDERKAT ATVLPSSDSP 
FVLPTTAIAA WWHYKRLSGF VAQAMQAILA NKMRSLLSML GILVGVASVI AMMALGEGAR 
VAMQEELKAM GSNMLSVRGG SAKIRGTSQG AGAVTRFTVK DVEAIAALRP LVRNASGVVN 
GSARVVYGNR NWSSSLLGAG YDYGTMRAAL PTVGRWFTAE ELQRRDKVAI IGVTVARELF 
GESNPLGKTI KINRINFTVI GLAPAKGFVG PQDEDDIVMI PLSTAMYRVL GRDYLSGIFV 
EVAEAHRVDE ARQRIAAFIR QRHRLPVDDD SFYIRDMTEI QKMLSSTTRT MSLLLGAIAA 
ISLVVGGIGI MNIMLVSVTE RTREIGLRKA LGARNSDIML QFLVESAGMT LLGGVLGLLV 
GIGVALGLTL VAGWAVKISL FSVLLATLFS AVTGLFFGLW PAQKAAALKP VEALRYE