| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0301 |
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| Symbol | |
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| ID | 3748130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 329598 |
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| End bp | 335081 |
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| Gene Length | 5484 bp |
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| Protein Length | 1827 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637772827 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_378620 |
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| Protein GI | 78188282 |
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| COG category | [R] General function prediction only
[S] Function unknown |
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| COG ID | [COG0457] FOG: TPR repeat
[COG1912] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATGC TGCAACCTCC CGTTGTGGTG TTGATGACCG ATTTTGGCAT CACCGATACC
TTTATTGGGC AAATGAAAGG AGTTATTCTC TCTCTCTGCC CAATCGCTCA ACTTATTGAT
TTAACGCACG CTGTACTACC TCAAAACGTG GTGCAAGGCG CTTTTTTGCT GGGCAAGTCG
CTCCCATTTT TGCCTGATGG ATCGGTTGTG GTTGCGGTGG TTGATCCGGG GGTAGGAAGC
ACGCGCCGCA TTATTGCCGT GCAAACAAGC CGCCACACCT TTCTTGCCCC CGATAATGGC
TTGCTTACCC CCATGCTTGC AAGTGGCGAT GTGCAGCAAT GCGTCTCCGT TACCAACGAG
CGTTACATGC TGCCGCAGCG CAGTTCCACC TTTCACGGAC GCGATATTTT TTCACCCGTA
GCGGCACACT TGGCAGCAGG CGTTCCCCTT GCCGAGCTTG GCAAAAGCAT GCCAATGGCT
GAGTGCGTTC AGCTTGAAGT GTTACGTGCC AACGTACTTG ATAACGGGAA CTGCATCGAA
AGTACCATTC TTTACACCGA CCACTTTGGT AACGCCGTAA CCACTATTGA GCGAGAATTA
TTGGCAGAAA AGCACGACTG GCTCATTCAT GTTAATGAGC TACGATTGCC ACTTTCCACC
ACCTATAGCG ACGTGGCTGA GCACCAACCC ATAGCATACA TTGGCAGCAG TGGCACGCTT
GAAATTGCCA TTCGCAACGG CAATGCCGCC GCCGCGCTTG GCTTACATGC AGGTGTGGCG
GTGAGGATGG AGAGGGGGGA GTGGGAAGTA GAGAGTGGGA TGTGGGAAGA AGTTGTACAA
GCGATACCTG ATTTGCTAAA GCAAGGGGTA ACGTTACATC AAAGCGGCAA ACATAATGAG
GCAGAAGCAT GTTATCAGCA AATACTGAAA CAACAACCTC ATCATATTGA TGCTCTACAC
TTGCTTGGCG TTCTATTTTA TCATAAAAAA GAATATAGCA AAGCACTTGA TTTACTGAAT
CAAGCAATAG CATTAAAACC AACCTTTACC GAAGCATATT CAAATAGAGG TGCTGTCCTT
AAAGAGTTAA AGCGCTTTGA TGAAGCTTTA GCAAGTTATA ATAAAGCTCT TGAGTTAAAA
GAAAATTATG CTGCTGCATG GTATAATCGA GCTAATCTAC TTAAAGAATG GAAGCAATTT
AGTGAAGCAA TTGAAAGCTA TAATAAAGCC ATTGAATTTC AACCAAACTA TCCCGAAGCA
TACTCAAATA GAGGAGTTGT TTTAAAAGAA CTTAAACAAT TTGATGCTGC TTTTGCAAGC
TATAATCAAG CAATAGCATT AAAACCAACC TATGTAGAGG CATATTCAAA TAAAGGCACG
GTCTTAAAAG AATTAAAACA ACTTGATGCA GCAATAGAAA GTTTTAACAA AGCTATAGCA
TTAAAGCCAG ACTATGCTGA AGTACAGTGG AATAAATCGT TAGTGTTGCT CTTGTCGGGC
AATTTTATTG ATGGTTGGAT GTTGTATGAA TGGCGATGGA AAAAAGCCGA TTTTACTTCG
CCAAAGCGCA ACTTTACACA ACCATTATGG CTTGGCAAGG AATCACTTGA ACATAAAACA
ATTCTCTTGC ATAGTGAACA AGGGCTTGGT GATACACTAC AATTTTGCCG ATATGCAACA
CTTGTTGCAA AACGGGGTGC TCGTGTTATT CTTGAAGTAC CCGATATACT TATCCCACTT
TTAAAGCAAC TTGAGGGAGT AGAGCAGATT ATTGCAAAAG GGAAAAAAAT CCCTCCATTT
GATTATCACA CTCCTCTTCT TAGCTTGCCA TTAGCCTTTA CAACAAGGCT TGAAAATATT
CCATCTCCTT CAAAATATCT CTTTATTGAT AACAATAAAA TAGAGGAATG GAAGCAACGA
TTACACACCA TTCCGCATCC TCGTATTGGA TTAGTTTGGA GTGGAAGAGC TGAACATAAA
AATGACCATA ATCGTAGCAT TGCATTGGCA GATTTGCTAC GTTATTTGCC AAATAAGTAT
CACTATGTAA GCTTACAAAA AGAGGTCAGA GATAGTGATA AAAAAACGCT GGACGTTACC
AGCAATATGG TTCATTTTGG TAATGAATTA CATGATTTTG CTGATACCGC CGCATTGTGC
GAGTTGATGG ATCTTGTGAT TAGTGTTGAT ACCAGTGTTG CCCATTTAAG CGCCTCGTTA
GGCAAACCAA CATGGATATT ATTGCCATTT ATCCCCGACT GGCGCTGGTT GCTTGATAGA
AACGATACAC CTTGGTATGC AAGTGCTACA CTCTATCGCC AACACACTCG TGATGATTGG
GAGAGTGTGC TTAAAAATAT AGCAACTGAT TTATATGATT ATTTTACAAC CGATAACAAA
GTAGCGGTAT CACATAAAGC AACAAAAGCA ATTCAAGCAT TGCTTAAAGA AGCTATAAAA
CTTCATCAAA GTGGAAAGCA AAATGAAGCT GCAATATGTT ATAAAAACAT CATACAACTG
CAACCAAACC ATGTTGATGC CTTACATTTG CTTGGCGTTG TAGCATTTCA AAAGGAGCAA
TATAATGAAG CTCTTAATCT TCTTAATCAA GCCATAGCGT TAAATACTGA TTTTGCAAGT
GCATATTTTA ATCGCGGCTT AGTATTTAAA AATCTGTACC ACTTTGATAA AGCATTAGAA
GATTTTGATA GAGCGTTACG GCTTAAACCA AATTATGCAG AAGCTTATCA TAAAAGAGGC
AATATTTTAA AAGAGCTTGG TTTAATAACA GCAGCCCTTT CAAGCTATAA TAACGCACTT
GCATTAAAAG CGGATTATGC GGGTGTATAT TTAGATAAAG CCATCATATT ATTACTTCTT
GGTAATTTTG CTGATGGATG GGATATTTAT GAATGGCGAT GGAAATGCAA AGATTTGCCA
TTAGTACAAC GTAACTTTAC ACAACCCTTA TGGCTTGGCC AGAAAGATAT CCAAAGTAAA
ACTATTTTAT TGCATAGCGA ACAAGGGCTT GGTGATACCA TTCAATTTTG CCGCTATACA
CAACTTGTTG CAGAGCGAGG TGCACTTGTT ATTCTTGAAG TACCAGCCTC ACTCGCCTCA
CTCATGCAAT CACTTGAAGG CGTAACTGAG ATTGTTGTAA AAGGCAAAAA ACTTCCTCCA
TTTGATTGTC ACTGTCCCCT TCTTAGCTTA CCATTAGCTT GTAATACAAC GCTTGAAAAT
ATTCCTTCTC CTTCAAAATA TTTATCGAGT AATACGAAAA AGCGTAATAA ATGGAAGGAT
CGTTTACAAG CTATACCACA ACCTCGTATT GGTTTAGTGT GGAGTGGTAG CACACAACAT
AAAAATGATC GCAATCGCAG TATAGAGCTA TCAGAATTAC TCCAATACCT CCCTGATGCA
TATCATTACA TAAGCTTACA AAAAGAGCTT CGTGAGAGCG ATAAAGCAAC AGTTGAAGCC
ACATCCAATA TTGTGCATTT TGGTGATGCA TTGCATGATT TTGCTGATAC GGCTGCATTG
TGCGAGTTGG TGGATATCGT TATTAGTGTT GACACGAGTG TTGCCCATCT CAGTGCTGCT
CTCGGTAAAC CGACATGGAT TTTATTGCCA TATATTCCCG ATTGGCGTTG GCTACTTGAT
AGAAACGATA CCCCTTGGTA TGCAAGTGCA ACGCTCTATC GCCAAGCGCA TCGCGATGAT
TGGCTGAGTG TGTTTAAGCG CTTGCAAGAG GATTTGCAAC AACGTTGCAT GGTAGAAAGT
GCCCAACAAC AATTGCCTAT CCATACAAGC CAGAATAACC ACATTGCCAC CTTATTGCAA
CAAGGTGTTC AACTGCATAA AAGTGGCAAA CAAAATGAAG CTGAGCTATG CTATCAAAAA
ATATTACAAT TGCAGCCAAA CCATGCAGAT GCCCTACATT TGCTTGGGGT ACTTTCTTTC
CAAAAAGAAA ATTATAGCCA ATCACTTGAA CTGCTTAACC AAGCAATTGC AATAAAAAGT
GATTTTGCAA GTGCATATTT TAATCGAGGG TTGGTCTTAA AAAATCTTAG TCAGTTTGAA
AAAGCAATTG AAGATTTTAA TAAAGCAATT GAACAAAAGC CTGAGTATGC TTCAGCATAT
CATAGTCGCG GAACTGTACA AAAAGAACTG AAACAATTTG ATGCAGCTCT TAAAAGCTAT
GAAAAAGCTA TAGCCCTAAA ACCTGATTAT ACGGAGGCAT ATTGCAATCG AGGTAATGCG
TTACAATTGC TTAAACGATT TAATGAAGCT ATTGATAGCT ATAATAAAGC TATTGCATTA
AAACCTCAGT ATGCCGAAGC ATACTCAAAT AGAGGTGTAG TTTTTAGAGA GCTTAAAGAA
CTTGATACTT CGTTAGATAA TTTCAATAAA GCTATTGAAT TAAAAGCTGA TTACGCTGAA
GCATACTCAA ACCGAGGTGT GGTATTTCGC GAACTTAAAA TGCTTGATAA TGCTTTAGCT
GATTTTAATA AAGCTATTGA ACTTAAAAAA GATTATGCTA TAGCTTATTG GAATAAATCG
CTTGTTTTAT TGTTACTTGG CAACTTTGCT GAAGGGTGGC AATGTTATGA ATGGCGTTGG
AAAAAAGCCG ATTTTACCTC ACCAAAGCGC AACTTTACAC AACCATTATG GCTGGGTGAA
GAATCAATTG CAGACAAAAC CATTTTATTG CATAGCGAAC AAGGGCTTGG TGATACCATT
CAATTTTGTC GCTATGCACC ACTTGTAGCA GAGCTTGGCG CTCGTGTTGT GCTCGAAATA
CCATCATCAC TGGCGTTACT ATTGCAACCA CTTGATGGCG TAGCTGAAGT TATAGTTAAA
GGCAAAACAC TGCCTCCATT TGATTATCAC TGCCCACTCC TCAGCTTACC ATTAGCCTTT
AAAACAACAC TTGAGACTAT TCCATTTCCA ACAAAATATT TGTCATTGCC GTCTCACAAA
ATTAAGCAAT GGCAGCAAAG AATCGGTAAT ATTGCAAAAC CTCGTATTGG CTTAGTGTGG
AGTGGCAGTA CAAAGCATAA AAATGACCAC AATCGCAGTA TAGAGTTATC AAAATTGCTT
GAATATCTTC CTGATCATTA TCATTACATA AGTTTACAAA AAGAGCTGCG TGAAAGCGAT
AAAGCCACAC TTGAAGCTAC AGCCAATATG GTGCACTTTG GTGATGAATT GCATGATTTT
ACAGATACTG CCGCATTATG CGAGTTGGTG GAACTTGTGA TTAGTGTTGA CACCAGTGTT
GCCCATTTAG CAGCAGCTCT CGGTAAACCA ACATGGATTT TATTGCCATT TATTCCCGAT
TGGCGTTGGT TGCTGGATAG AAACGATACT CCTTGGTATG CAAGTGCTAC GCTCTATCGC
CAACACACTC GTGATGATTG GACGGCTGCG CTTGAACGTT TGCATGAGGA TTTGCGGCAA
CGGTTTTTAG TGAGTGAGAT GTAG
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| Protein sequence | MNMLQPPVVV LMTDFGITDT FIGQMKGVIL SLCPIAQLID LTHAVLPQNV VQGAFLLGKS
LPFLPDGSVV VAVVDPGVGS TRRIIAVQTS RHTFLAPDNG LLTPMLASGD VQQCVSVTNE
RYMLPQRSST FHGRDIFSPV AAHLAAGVPL AELGKSMPMA ECVQLEVLRA NVLDNGNCIE
STILYTDHFG NAVTTIEREL LAEKHDWLIH VNELRLPLST TYSDVAEHQP IAYIGSSGTL
EIAIRNGNAA AALGLHAGVA VRMERGEWEV ESGMWEEVVQ AIPDLLKQGV TLHQSGKHNE
AEACYQQILK QQPHHIDALH LLGVLFYHKK EYSKALDLLN QAIALKPTFT EAYSNRGAVL
KELKRFDEAL ASYNKALELK ENYAAAWYNR ANLLKEWKQF SEAIESYNKA IEFQPNYPEA
YSNRGVVLKE LKQFDAAFAS YNQAIALKPT YVEAYSNKGT VLKELKQLDA AIESFNKAIA
LKPDYAEVQW NKSLVLLLSG NFIDGWMLYE WRWKKADFTS PKRNFTQPLW LGKESLEHKT
ILLHSEQGLG DTLQFCRYAT LVAKRGARVI LEVPDILIPL LKQLEGVEQI IAKGKKIPPF
DYHTPLLSLP LAFTTRLENI PSPSKYLFID NNKIEEWKQR LHTIPHPRIG LVWSGRAEHK
NDHNRSIALA DLLRYLPNKY HYVSLQKEVR DSDKKTLDVT SNMVHFGNEL HDFADTAALC
ELMDLVISVD TSVAHLSASL GKPTWILLPF IPDWRWLLDR NDTPWYASAT LYRQHTRDDW
ESVLKNIATD LYDYFTTDNK VAVSHKATKA IQALLKEAIK LHQSGKQNEA AICYKNIIQL
QPNHVDALHL LGVVAFQKEQ YNEALNLLNQ AIALNTDFAS AYFNRGLVFK NLYHFDKALE
DFDRALRLKP NYAEAYHKRG NILKELGLIT AALSSYNNAL ALKADYAGVY LDKAIILLLL
GNFADGWDIY EWRWKCKDLP LVQRNFTQPL WLGQKDIQSK TILLHSEQGL GDTIQFCRYT
QLVAERGALV ILEVPASLAS LMQSLEGVTE IVVKGKKLPP FDCHCPLLSL PLACNTTLEN
IPSPSKYLSS NTKKRNKWKD RLQAIPQPRI GLVWSGSTQH KNDRNRSIEL SELLQYLPDA
YHYISLQKEL RESDKATVEA TSNIVHFGDA LHDFADTAAL CELVDIVISV DTSVAHLSAA
LGKPTWILLP YIPDWRWLLD RNDTPWYASA TLYRQAHRDD WLSVFKRLQE DLQQRCMVES
AQQQLPIHTS QNNHIATLLQ QGVQLHKSGK QNEAELCYQK ILQLQPNHAD ALHLLGVLSF
QKENYSQSLE LLNQAIAIKS DFASAYFNRG LVLKNLSQFE KAIEDFNKAI EQKPEYASAY
HSRGTVQKEL KQFDAALKSY EKAIALKPDY TEAYCNRGNA LQLLKRFNEA IDSYNKAIAL
KPQYAEAYSN RGVVFRELKE LDTSLDNFNK AIELKADYAE AYSNRGVVFR ELKMLDNALA
DFNKAIELKK DYAIAYWNKS LVLLLLGNFA EGWQCYEWRW KKADFTSPKR NFTQPLWLGE
ESIADKTILL HSEQGLGDTI QFCRYAPLVA ELGARVVLEI PSSLALLLQP LDGVAEVIVK
GKTLPPFDYH CPLLSLPLAF KTTLETIPFP TKYLSLPSHK IKQWQQRIGN IAKPRIGLVW
SGSTKHKNDH NRSIELSKLL EYLPDHYHYI SLQKELRESD KATLEATANM VHFGDELHDF
TDTAALCELV ELVISVDTSV AHLAAALGKP TWILLPFIPD WRWLLDRNDT PWYASATLYR
QHTRDDWTAA LERLHEDLRQ RFLVSEM
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