| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0275 |
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| Symbol | |
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| ID | 3748158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 302186 |
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| End bp | 304189 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637772801 |
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| Product | NAD-dependent DNA ligase |
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| Protein accession | YP_378594 |
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| Protein GI | 78188256 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATTA TAGATGCCTC TGAACGCATT GCGCAGCTTC GCCAAGAAAT AGAGCGCCAT
AACTACCTTT ATTTTAACGA GGCTAAACCT GAGCTTTCCG ACTACGAGTT CGATAAGCTG
CTTGAAGAGC TGATGGCGCT TGAGCGTGAA TTCCCCGATT TGCTGACGCC CGATAGCCCA
TCGCAGCGAG TTGGCGGCAC TATCACGAAG GAGTTCCCCG TTGTAACGCA CCGTGAACCT
ATGCTAAGCC TTGCCAACAC CTATTCGGCT GGCGAGGTTG CGGAGTTTTA CAACCGTGTT
GCTAAACTGC TTGCGGCTGA AAATGTGCAT AAGCAGGAGA TGGTTGCCGA GCTAAAGTTT
GATGGCGTTG CTATTAGTTT GCTCTATCGC GATGGTGTAT TAGTGCGCGG AGCAACGCGA
GGCGATGGCG TGCAAGGCGA CGATATTACC CCCAACATTC GCACCATTGC CTCCATTCCG
CTTCGCCTCC ATCAGCCGCT TGCTGGCGAG GTAGAGGTGC GGGGCGAAAT TTTTATGCGC
AAAGAGGATT TTGAGCAATT GAACGATAAC CGTCCCGAAG AGGAGCGATT TGCCAATCCA
CGCAATGCCA CGGCTGGTAC GCTGAAATTG CAAGATTCGG CTGAAGTGGC TCGTCGCCGC
ATGAATTTTG TGGCATACTA TCTTAAAGGA TTAAAGGATG AAACGCTGGA TCACGTCAGT
CGTCTTCATA AGCTTGAAGC GCTTGGCTTT ACAACGGGTG GACATTATCG TCGTTGTAAA
ACAATAGAAG AGATCAACAC CTTTATTAAT GAGTGGGAGG AAAAGCGCTG GAAATTGCCT
TACGAAACCG ATGGTGTGGT GCTTAAACTC AATAACGTGC AACTTTGGGA GCAGCTTGGC
GCTACCGCAA AAAGCCCTCG TTGGGCAATT GCCTACAAAT ATCCCGCTCA ACAAGCCCGC
ACGCAGCTTT GTAACGTGGT GTTTCAAGTG GGACGTATTG GCACCATTAC GCCTGTTGCC
GAACTAACGC CCGTACTGCT TGCAGGCTCC ACCGTTTCAC GCTCCACGCT ACACAATTTT
GATGAAATTG AGCGGCTTAG CGTTATGATT CTCGATTATG TGATGATTGA AAAGTCGGGC
GAAGTGATCC CCAAAGTAGT GCGCACCTTA CCCGATGAAC GCCCTGCTGA CGCGCACGCC
ATTGCCATTC CCACCCACTG CCCCGAATGC GATACGCCGC TTATCAAACC TGAAAATGAG
GTAAGCTGGT ACTGCCCAAA TGAGGAGCAT TGCCCCGCAC AAATTCGTGG ACGCTTGCTG
CACTTTGCTT CCCGCAACGC CATGGATATT AAAGGACTTG GAGATGCACT TGTTGAGCAG
CTTGTTGCTT GGGGATTAGT ACACGATGTT GGCGACCTCT ATCTCTTGCA AGAACCACAA
CTTGAGCGTA TGGAACGCAT GGGCAAAAAA TCCGCCCAAA ACCTTATTCG TGCTCTTGAC
GAAAGCCGCA CGCGCAGCTA CGACCGCCTA CTCTACGCAC TCGGCATTCG CCACGTTGGA
CGCGCCACTG CTCGCGAACT TGCCCACGCC TTCCCCACGC TTGATGCCCT CATGCAAGCC
AATGAAGAGC GACTTGCCGA AGTGCCCGAC ATTGGCACAA CCGTTGCGCA AAGCATTGTG
GACTTTTTCG CTAAACCATC CTCCCGTCAA TTGGTTGATA AACTCCGTGA AGCTCGCTTG
CAACTTGCCG CCTCAGCAAG TAAGATTGAG CAAGTAAACC GCAATTTTGA AGGTATGAGC
CTGCTCTTTA CCGGCACGCT TGAACGCTAC ACACGCCAAC AAGCTGCCGA ACTTGTTGTG
GAACGAGGAG GACGTGTGGT TGAAAGCATC AGCAAAAAAA CCTCACTTCT TGTTGCTGGT
CGCGACGGCG GCAGCAAGCT TGACAAAGCG CACAAGCTCG GCGTGCGAGT GATTTCGGAG
GATGAGTTTA TGGGGATGAT GTAA
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| Protein sequence | MTIIDASERI AQLRQEIERH NYLYFNEAKP ELSDYEFDKL LEELMALERE FPDLLTPDSP
SQRVGGTITK EFPVVTHREP MLSLANTYSA GEVAEFYNRV AKLLAAENVH KQEMVAELKF
DGVAISLLYR DGVLVRGATR GDGVQGDDIT PNIRTIASIP LRLHQPLAGE VEVRGEIFMR
KEDFEQLNDN RPEEERFANP RNATAGTLKL QDSAEVARRR MNFVAYYLKG LKDETLDHVS
RLHKLEALGF TTGGHYRRCK TIEEINTFIN EWEEKRWKLP YETDGVVLKL NNVQLWEQLG
ATAKSPRWAI AYKYPAQQAR TQLCNVVFQV GRIGTITPVA ELTPVLLAGS TVSRSTLHNF
DEIERLSVMI LDYVMIEKSG EVIPKVVRTL PDERPADAHA IAIPTHCPEC DTPLIKPENE
VSWYCPNEEH CPAQIRGRLL HFASRNAMDI KGLGDALVEQ LVAWGLVHDV GDLYLLQEPQ
LERMERMGKK SAQNLIRALD ESRTRSYDRL LYALGIRHVG RATARELAHA FPTLDALMQA
NEERLAEVPD IGTTVAQSIV DFFAKPSSRQ LVDKLREARL QLAASASKIE QVNRNFEGMS
LLFTGTLERY TRQQAAELVV ERGGRVVESI SKKTSLLVAG RDGGSKLDKA HKLGVRVISE
DEFMGMM
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