| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0254 |
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| Symbol | mnmA |
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| ID | 3748174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 284409 |
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| End bp | 285488 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637772779 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_378573 |
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| Protein GI | 78188235 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAC CGCACCATAT TCTTGTTGGC ATTTCAGGCG GGGTTGACTC TGCCGTTGCA
ACTTGCTTGC TTGTGCAGCA AGGCTACCGT GTAACGGCTG TAAACCTTCG CTTGCTGGAT
ACTCTGGATG CACCCTATGC TGAGCCAACA CTTCAGCCAT CTTCCCTTGT GGTAAGCGAC
CATCCCGACT ACCACATTCC CTTGTTTTCA CTTAACCTTA GCCGCACCTT TCGTGATGAA
GTGATGCGCT ATTTTAATGC TGAATATCTT GCAGGACGAA CGCCAAACCC TTGCATGGTA
TGCAATCGGC AGGTAAAGTG GGCAGGGTTG CGCCATGCAG CGGAATTGAT TGGTGCCAAT
GCCATTGCTA CGGGGCATTA TGCCAACAGA GCCTTTAGTG ATGGACGTTA TCGGCTTTAC
AAGGGGGCTG ATAGCCAGAA AGATCAAAGC TATTTTTTGT GGATGCTTTC GCAAAAGGAT
TTAGCCCACA CCTTGCTACC GCTTGGTGGC TTAACAAAAC CCGAAGTGCG CGAGCTTGCG
AAAAACTTTG GCGTTCGTGC GGCTGAAAAA AAAGAGAGCC AAGAGATTTG CTTTGTGCCC
AATGACGACT ACTCTACCTA TCTTATGAGT GCCATGCCTG AGCTTGCTGA GCGCGTGGCA
GATGGCGACA TTGTTGATGC GGCAGGCACA GTCATTGGCA AGCATCGAGG CTATCCGTTT
TACACCATTG GGCAGCGACG AGGGCTTGGC GTGTCGGCAA AAGAGCCGCT CTACGTTACA
GCGCTTGACG CTGAGCAGAA TCGCATTCAC GTAGGGCACA AAGCTGCGTT AATGAGCCAT
CGCTTACTTG CATCACGCTG CAATTGGATT GGCATGGAGC CGCCATCATC TTCAGTGGAA
CTACTTGGGC GCATTCGCTA CCGCGATCGC CAAACAGCTT GCAGGGTTAC ACCTCTTGAA
AATGGGCAGA TAGAGGTGGT TTTTCAGGAA CCAAAAAGCG CCATTACGCC CGGTCAAGCG
GTTGTGTTTT ATTGTGGAGA TGAGGTTTTG GGAGGAGGAT TTATTGAGGA GGGAACGTAA
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| Protein sequence | MSTPHHILVG ISGGVDSAVA TCLLVQQGYR VTAVNLRLLD TLDAPYAEPT LQPSSLVVSD
HPDYHIPLFS LNLSRTFRDE VMRYFNAEYL AGRTPNPCMV CNRQVKWAGL RHAAELIGAN
AIATGHYANR AFSDGRYRLY KGADSQKDQS YFLWMLSQKD LAHTLLPLGG LTKPEVRELA
KNFGVRAAEK KESQEICFVP NDDYSTYLMS AMPELAERVA DGDIVDAAGT VIGKHRGYPF
YTIGQRRGLG VSAKEPLYVT ALDAEQNRIH VGHKAALMSH RLLASRCNWI GMEPPSSSVE
LLGRIRYRDR QTACRVTPLE NGQIEVVFQE PKSAITPGQA VVFYCGDEVL GGGFIEEGT
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