| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0248 |
|---|
| Symbol | |
|---|
| ID | 3747908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 279486 |
|---|
| End bp | 280682 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637772773 |
|---|
| Product | protoporphyrinogen oxidase, putative |
|---|
| Protein accession | YP_378567 |
|---|
| Protein GI | 78188229 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1232] Protoporphyrinogen oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAGA ATGATGTTGT GGTGGTTGGC GGTGGTATTA GCGGTCTCTC TCTTGCCTAT
TATGCGGTAA AGAGCGGCTT AAAAACCACG CTGCTTGAAA AAAATGAAAC GCTTGGTGGC
TCTTTTGCCT CCCCACGCTA CAAGTCGGGT GGCAAAGAGT TTTGGATGGA ACTTGGGGCG
CACACTTGTT ATAGCTCCTA TCAAAATTTG CTCTCCATTG TTGAAGAGTG TGGCATTATG
GACACCATTA TCCCTCGTGC CAAAGTGCCT TTTACGCTGC TGATTGATGG CGAAATTAAA
TCGCTGATGT CGCAGCTCCA TATTATGGAG TTGTTAACGA ATGGTCCCTC TATTTTCTCC
CTTAAAAAAG AGGGGCAAAC GGTGCGCTCG TACTATGAAA AAATAGTTGG AAAACGCAAC
TACAGCGAAG TTATCAGCCA CTTTTTTAAT GCCGTGCCTT CGCAAAAAAC CGATGACTTC
CCTGCTGAAA TGATGTTTAA GAGCCGTCCA AAACGGAAAG ATGTGCTCAA AAATTACACC
TTTAAACATG GTTTACAAGG AGTAGCCGAA ACCATTGCAG CAACTCGCGG CTTAAATGTT
TTTACAGGGC AGGATATTGT AAACATTAGC ATGGACAACG GAAATTACGT TGTAAGCGCC
AGCAACGGTG TAAGTTATGC GGCAAAAACG TTAGTAATGG CAACCCCTTC AGCCATAAGC
GCCAAGCTGC TCCAAGAGGT TAATGGCGAC TTAGCGGCGC ATCTCAGCAA ACTGAAAGCT
GCCACAGTGG ATTCCATTGG CGTGGTAGTT CCAAAAGATG CCATCAACAT AAAGCCCGTT
GCGGCTATTA TTTCCCCCAA CGATATCTTC TTTTCAGTGG TGGCACGCGA TACGGTGCCT
GACGATAATT ATCGTGGCTT TGCTTTCCAC TTCCGTCCGG GGTTGGATGA CCGCACCAAG
CGCGATCGCA TTGCGGCGGT GTTGGGCATT AATTTTTCAA AGGTTGAACA TACCGTGTCG
CGCTTAAATA CCGTGCCATC GTTGCGGCTT GGGCATAACG CATGGCTTGA ACAAACCAAT
GCGTTGCTAA AAAATAACCG TTCGCTGCTC TTAACGGGGA ACTACTTTGG CGGCATGGCA
ATTGAGGATT GCGTCAGCCG TTCACGCAGC GAGTTTGAGC GCCTGAGCGG TAAATAA
|
|---|
| Protein sequence | MMQNDVVVVG GGISGLSLAY YAVKSGLKTT LLEKNETLGG SFASPRYKSG GKEFWMELGA
HTCYSSYQNL LSIVEECGIM DTIIPRAKVP FTLLIDGEIK SLMSQLHIME LLTNGPSIFS
LKKEGQTVRS YYEKIVGKRN YSEVISHFFN AVPSQKTDDF PAEMMFKSRP KRKDVLKNYT
FKHGLQGVAE TIAATRGLNV FTGQDIVNIS MDNGNYVVSA SNGVSYAAKT LVMATPSAIS
AKLLQEVNGD LAAHLSKLKA ATVDSIGVVV PKDAINIKPV AAIISPNDIF FSVVARDTVP
DDNYRGFAFH FRPGLDDRTK RDRIAAVLGI NFSKVEHTVS RLNTVPSLRL GHNAWLEQTN
ALLKNNRSLL LTGNYFGGMA IEDCVSRSRS EFERLSGK
|
|---|
| |