| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0247 |
|---|
| Symbol | |
|---|
| ID | 3747907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 278397 |
|---|
| End bp | 279482 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637772772 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_378566 |
|---|
| Protein GI | 78188228 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTATTGA TTGGAACACG CATGGTTGAT TGGAGTTCAC TACAAACCTA CCTTGTCATT
GCATTACTCC TCTTGCTCTT TGCCTTAGTA GTAATGTTGG GTGCTAATTC GCTTTTTCAG
CAGCTTGTAG TGCGCATTCG AGCCACCATG CGCGGTGTTA GTTTGCCGTT GGAGTTGGTC
GCATGGCCTT TTCGATTGCT TATGGTTTTG GCAGGAATGG CAGTATTAGC AAACAACGTT
CCCTTATCAG CACGCATTGA TGTGCTTATT AAGCATAGCT TACTGATTGG TGGAATTATT
GGGGTAACGT GGTTTTTAAC CCGCCTTATG CTTGTTTTTG AGCAGGTGGT GCTTGACTAC
TATGCTACCA AAGTGCGCGA AAGTGAAGCT GTCCGCAAAG TTGCCACACA CATTAGCTTA
GCACGTAAAA TTATTGATGC TCTCTTGGTG CTTGTAGCTA TTGCTGGGGC ACTTATGACC
TTTGATACCG TGCGTCAGGT AGGATTAAGC ATTTTAGCCT CGGCTGGTAT TTTAAGTGTA
ATGGTTGGTT TGGCAGCACA AAAAAGCTTA ACCACCCTGA TTGCGGGCGT ACAAATTGCC
ATTACCCAAC CCGTAACCAT TGGCGATGAA GTGGTGGTAG AAAATGAAAA AGGAACCATT
GAGGAAATTA CGCTGACCTA CGTTGTAATG AAAATTTGGG ATGAACGCCG TATGATTCTG
CCCATTACAT GGTTTCTTGA TCGCCCGTTT GAAAATTGGA CGCGCACCTC GCCTGAACTA
CTTGGATCGG TTTTTCTCTC TATTGACTAT TTGCTTTCCC CTGACGTGTT AAGGCAGGAG
CTGGAACGCC TTGTTGCTAC TACCCCGCTT TGGGATGGAC GTGTAGTAAA ATTGCAAGTA
ACCAACTCAA CGGAGCGCTC AATGGAAATT CGTGCGTTGG TAAGTGCGGC AAATGCCTCG
CAGTTATGGG ATTTGCGCTG CTTAGTACGC GAAGGGCTGA TTGCATTTTT ACGCAACAAC
TATAATGACT TACTGCCACA TCTAAATATT GAAATAGAAC GTGGACGATC ACCACAAAAC
AGATGA
|
|---|
| Protein sequence | MLLIGTRMVD WSSLQTYLVI ALLLLLFALV VMLGANSLFQ QLVVRIRATM RGVSLPLELV
AWPFRLLMVL AGMAVLANNV PLSARIDVLI KHSLLIGGII GVTWFLTRLM LVFEQVVLDY
YATKVRESEA VRKVATHISL ARKIIDALLV LVAIAGALMT FDTVRQVGLS ILASAGILSV
MVGLAAQKSL TTLIAGVQIA ITQPVTIGDE VVVENEKGTI EEITLTYVVM KIWDERRMIL
PITWFLDRPF ENWTRTSPEL LGSVFLSIDY LLSPDVLRQE LERLVATTPL WDGRVVKLQV
TNSTERSMEI RALVSAANAS QLWDLRCLVR EGLIAFLRNN YNDLLPHLNI EIERGRSPQN
R
|
|---|
| |