| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0242 |
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| Symbol | |
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| ID | 3747902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 273517 |
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| End bp | 274563 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637772767 |
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| Product | dihydrouridine synthase TIM-barrel protein nifR3 |
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| Protein accession | YP_378561 |
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| Protein GI | 78188223 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0191961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATTG GAGCCCTCAG TATTGAGCGA CCGATAATTC TTGCCCCAAT GGAAGATGTT
ACCGATCGCT CATTTCGTCA ACTCTGCAAA CGGCATGGTG CCGATATTGT TTATACCGAA
TTTATTAGTG CCGAAGCGTT ACGGCGCGGT GCTGAAAAGT CGCTCCGTAA GCTCAAAGTT
GACGACATGG AACGCCCTTA CGCTATCCAA ATTTTTGGGA GCACGGTTGA GTCCATGGTT
GAAGCGGCAA TCATTGCAGC CTCCTACCAG CCCGATTATC TCGATATTAA CTTTGGCTGT
CCCGTAAAGA AAGTTGCAGG CAAAGGGGCT GGCGCGGCAC TGTTACGTGA GCCTGAAAAA
ATGGCAGCAA TTAGTGCAGC AGTGGTTAAA GCCGTTGCAA TTCCCGTAAC GGCTAAAACC
CGCATTGGCT GGGATTTCGA TTCCATTAAC ATTCTTGATA TTATTCCCCG CCTTGAAGAT
GCTGGTATTC AAGCCTTAGC GCTGCACGGG CGTACTCGTA GCCAGATGTA TAAAGGCACT
GCCGATTGGC AATGGATTCG TGCGGCAAAA GAGAAAGCTC ACATTCCGCT GATTGCCAAT
GGCGACATTT GGAACGCTGA AGATGCCGCT CGCATGTTTG ATGTTACCGC TGCTGATGGC
GTTATGATTG GGCGAGGTTC CATTGGCAAC CCCTTTATTT TTCAGCAAGC CAAACATTTC
CTTGCGCACG GTACGTTGCT CCCACCGCCC GATTTTCGCC AACGCATTGC CGTTGCCATT
GAGCACTTCC AGCTCTCCTT AGCATATAAA GGTGAAAAAT ATGGCGTGCT TGAAATGCGC
CGCCACTATT CCACCTACCT CAAAGGCTTA CCAATGGTAT CGCGTGTGCG CAACAAGTTG
GTGCGTGAAG ATAATCCTAA CAATATTGTG GAACTGTTGT TAGCGTACCG CGAAGAGTGC
GAAAGTTACG CTCGTGAAGG GAGGTTAAGC GAAGGGGTAG AGTTTCTTAA TGATCATTCA
CCAAAGCTGG AAATGAGGGA GGGTTAA
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| Protein sequence | MRIGALSIER PIILAPMEDV TDRSFRQLCK RHGADIVYTE FISAEALRRG AEKSLRKLKV
DDMERPYAIQ IFGSTVESMV EAAIIAASYQ PDYLDINFGC PVKKVAGKGA GAALLREPEK
MAAISAAVVK AVAIPVTAKT RIGWDFDSIN ILDIIPRLED AGIQALALHG RTRSQMYKGT
ADWQWIRAAK EKAHIPLIAN GDIWNAEDAA RMFDVTAADG VMIGRGSIGN PFIFQQAKHF
LAHGTLLPPP DFRQRIAVAI EHFQLSLAYK GEKYGVLEMR RHYSTYLKGL PMVSRVRNKL
VREDNPNNIV ELLLAYREEC ESYAREGRLS EGVEFLNDHS PKLEMREG
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