| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0227 |
|---|
| Symbol | |
|---|
| ID | 3747815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 257107 |
|---|
| End bp | 260907 |
|---|
| Gene Length | 3801 bp |
|---|
| Protein Length | 1266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637772754 |
|---|
| Product | magnesium-chelatase, subunit H |
|---|
| Protein accession | YP_378548 |
|---|
| Protein GI | 78188210 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
|---|
| TIGRFAM ID | [TIGR02025] magnesium chelatase, H subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGATA AAATCAGAAT TGCCGCTATT GTCGGCATGG AGCAATGCAA CCAACGAGTA
TGGCGTGAAG TTACCGCCAA AATTGCTGAC CATGCCGAAC TGACTCAATG GACAGATCAG
GATCTTGAAC ATCAAAATCC TGAAACAGCC GAAGCTATCC GAAATGCCGA CTGTATTTTT
ACCACGTTGA TTCAATTCAA AGGTCAAGCT GATTGGCTTC AGGAGCAAAT TGAGCAGTCA
AACGTACAGC TTGTGTTTGC TTATGAGTCT ATGCCCGAAG TAATGCAGCT TACCAAAGTT
GGTAATTATG TGGTGTCGGG CGATGGTGGT GGAATGCCGG ACATTGTTAA AAAAGTGGCA
AAAATGTTGG TGCATGGGCG CGACGAAGAT GCGTTGTATG GCTACATGAA GCTGCTGAAG
GTTATGCGCA CCATGTTGCC GCTTATTCCT AAAAAAGCTA AAGATTTTAA AAATTGGATG
CAGGTTTACA CCTATTGGAT GAATCCAACG GGCGATAACC TTGCCTCAAT GTTTAATTTC
ATTATGGCTG AGTACTTTAG CGTTGGCGTT AAAGTTGAAA AGGTGCAAGA AGTTCCCACC
ATGGGTTTTT ACCATCCCGA TGCACCTGAG TACCAGAAAG ATTTGCACCA TTACGAAAAA
TGGCTCCATA AGCACGATCG TCATGCTACA AGCAAGCGTA ATGTTGGGCT TCTCTTTTTC
CGCAAACATC TTCTTCAAGA GAAAGAGTAT ATAGACAATA CCATCCGTGC GATTGAGGCA
AAGGGATTAA ATCCACTGCC AATTTTTGTG ATGGGTGTGG AAGGGCACGT TGCGGCTCGT
GAGTGGTTTA CGCACAATAA TATTGATATG CTCATCAACA TGATGGGCTT TGGCTTTGTG
GGTGGTCCGG CTGGTGCTAC AACACCGGGC GCTTCAGCGG CTGCACGCGA AGAAATTCTG
GGCAAAATGA ATGTGCCGTA TGTGGTTTCG CAGCCACTCT TTATTCAGGA TATTACTTCA
TGGACATCGC AAGGCGTTGT GCCGCTGCAA TCAGCCATGA CCTACTCATT GCCTGAAATG
GATGGTGCCG TATGCCCTGT GGTATTGGGT GCTATTAAAG ATGGACGTTT GCAAACGGTG
CCCGATCGCT TAGAGAGACT TGCTGGCATT GCTAAAAAGT TTTCAGAATT GCGCCACACC
GATAACAGCC ATAAAAAAGT GGCAATGGTG GTTTACGATT ATCCTCCCGG TATGGGTAAA
AAAGCAAGTG CGGCATTGCT TGATGTTCCA AAGAGTATTT ATAACATTTT GCTCTCGTTG
CGTGCTGAAG GGTATAACGT TGGTGAATTA CCAGAGTCGC CCGAAGCTTT GTTGGCAATG
CTTGATAAAG CTACCGATTA TGAAATTCAA GCCCATGAGC CTGATTGCTT TGCTATTAAT
CGTGAACAAT TTAATAGTAT AACGACCGTT CGTGAGCGTG AGCGTATTGA AAATCGTTGG
AATGGTTTCC CCGGTGAAAT TGCTCCGATT AAGCCCGATA ATCTTTTTAT TGGTGGCATT
ACGCTTGGCA ACATCTTTAT TGGCGTACAG CCACGTCTTG GCATTCAAGG CGATCCAATG
CGCTTGCTGT TCGATAAAGA GAATACGCCA CACCACCAAT ACATTGCCTT CTATCGCTGG
ATTAGCCGTA TTTTTGGTGC TCATGCCATG ATGCATGTGG GTATGCACGG TACGGTTGAG
TGGATGCCCG GTCTTCAGCT TGGCGTTACG GGAGATTGTT GGTCGGATGC ATTGCTTGGT
GAAGTTCCTC ACTTCTACAT TTATCCAATC AACAACCCCA GTGAAGCAAA CATTGCAAAG
CGCCGTGGCT ATGCAACCAT GATTTCGCAT AATATTCCAC CGTTGGCACG CGCTGGTCTC
TATAAAGAGC TGCCAAACTT TAAGAATATG TTGAACGATT ATCGCGAACG TGGATTGCAG
AGTCAAGCGG ATGCGGAAAC CGAAGAGGTC ATTCTTACAA AAGCGCAGCA GCTTAATTTA
ACGGATGATT GCCCACGTAC CGAAGGAGAG GATTTCCAAG ATTACATTAG TCGCTTATAC
ACCTACATGA TGGAGTTGGA AGGGCGTTTA ATTTCCAATT CGTTGCATGT ATTTGGAGAA
ACCCCTAAAG CTGATACGCA GCTTACAACG GTTACTGAGT ATCTCAAAGT TCGTGGTAAC
GAAAAGTCGC TGCCATCCAT CATTCTCTAC GCAATTGGTG AGGGTGAAAA GTGGGGCGAT
TATGCCACGT TAGCCACCCA TGCTCGTCAA GGCGAAAGTG AAGCGATGCG CGTGCGCGAA
ATTGTTGATG AGCACACTCG CACCTTTATT GACGAAACTA TTTTTGGGCG TAGCAATCCT
TCCACCGTCT TTAATACCAT TACGGGAGGC TCTCGTGTTT CGCAAGAAAT GGCTGAAGCT
CTTAACAGCG CGTTGCAAGA TGGTCTTGCA TTAAAACGTG CTCTTGAGGA TAACAGCAAT
GAAATGAAAG GGTTACTCCG AGCCTTGTGT GGTGAGTACA TTCCTTCAGG CGCTGGTGGC
GACTTAGTGC GCGATGGTGC TGGCATTTTG CCAACGGGGC GCAATATTCA TGCGATTGAT
CCTTGGCGTA TTCCCTCCGA GCTTGCTTTT AAGCGTGGTA AGCAAATTGC TGAATCCATT
CTTCAACGCC ATGTTGAAGA AAATGGCGAA TATCCTGAAA CCATTGCTCA AGTGCTTTGG
GGACTTGATA CCATTAAGAG TAAGGGCGAA GCGGTTGCTG TTATTGTGCA TTTAATGGGT
GCCGAACCAG CTTACGATGC ACAGAACAAA ATTAGCCACT ATCGTTTAGT GCCGCTTGAA
AAGCTTGGGC GTCCAAGAGT TGATGTGCTT ATTCAAATTA GCTCGATTTT CCGCGACACT
TTTGGTGTGT TGGTTGATCA CCTTGATAAA CTTGTGAAAG ATGCGGCACG TGCTGACGAG
CCACATGAGA TGAACCATAT TAAAAAGCAT GTTGATGCCG CGTTAGCCGA GGGTAAAGAT
TTTGAGAGTG CAACCTCTCG CCTCTTTACG CAAGCACCTG GAGCTTATGG TTCACAGGTT
GAAGAGCTTG TTGAAGATTC TGCATGGGAG TCGGAAGAGG ATCTCGACAA CATGTTTATT
AAACGTACTG GTTTTGCGTA TGGTGGTAAT CGCTATGGCG ATCAGCAAAC CGATATTTTA
CAAGGCTTGC TGAGCACGGT TGATCGTGTT GTTCAGCAAG TTGACTCGGC TGAATTTGGT
ATTTCCGATA TTGATCGCTA CTTCTCTTCA TCGGGAGCAT TGCAGCTTTC GGCACGTCGT
CGCAATCCAA AAGGCGATAG TGTTAAGCTG AATTATGTTG AAACCTTTAC GGCTGATGTG
AAAATAGATG ATGCCGATAA AGCGCTAAAG GTTGAATTCC GTACCAAACT GCTTAACCCA
AAATGGTTTG AAACCATGTT GGAGCAAGGG CATAGTGGAG CTGCGGAAAT TAGCAATCGC
TTTACCTACA TGCTTGGTTG GGACGCTGTT ACCAAAGGCG TTGATGATTG GGTGTATAAG
GAAGCGGCAG AAACCTACGC AATGGATCCA AAAATGCGTG AGCGCTTAAT GAAGGTGAAT
CCAAAAGCCT TTAAAAATAT TGTGGGACGT ATGCTTGAAG CCAGCGGACG TGGCATGTGG
AGCGCTGACC CCGATATGAT TGAAAAGCTT CAGGAAATTT ATTCTGATCT TGAAGATCGT
CTTGAAGGTA TTGAAGTGTA A
|
|---|
| Protein sequence | MRDKIRIAAI VGMEQCNQRV WREVTAKIAD HAELTQWTDQ DLEHQNPETA EAIRNADCIF
TTLIQFKGQA DWLQEQIEQS NVQLVFAYES MPEVMQLTKV GNYVVSGDGG GMPDIVKKVA
KMLVHGRDED ALYGYMKLLK VMRTMLPLIP KKAKDFKNWM QVYTYWMNPT GDNLASMFNF
IMAEYFSVGV KVEKVQEVPT MGFYHPDAPE YQKDLHHYEK WLHKHDRHAT SKRNVGLLFF
RKHLLQEKEY IDNTIRAIEA KGLNPLPIFV MGVEGHVAAR EWFTHNNIDM LINMMGFGFV
GGPAGATTPG ASAAAREEIL GKMNVPYVVS QPLFIQDITS WTSQGVVPLQ SAMTYSLPEM
DGAVCPVVLG AIKDGRLQTV PDRLERLAGI AKKFSELRHT DNSHKKVAMV VYDYPPGMGK
KASAALLDVP KSIYNILLSL RAEGYNVGEL PESPEALLAM LDKATDYEIQ AHEPDCFAIN
REQFNSITTV RERERIENRW NGFPGEIAPI KPDNLFIGGI TLGNIFIGVQ PRLGIQGDPM
RLLFDKENTP HHQYIAFYRW ISRIFGAHAM MHVGMHGTVE WMPGLQLGVT GDCWSDALLG
EVPHFYIYPI NNPSEANIAK RRGYATMISH NIPPLARAGL YKELPNFKNM LNDYRERGLQ
SQADAETEEV ILTKAQQLNL TDDCPRTEGE DFQDYISRLY TYMMELEGRL ISNSLHVFGE
TPKADTQLTT VTEYLKVRGN EKSLPSIILY AIGEGEKWGD YATLATHARQ GESEAMRVRE
IVDEHTRTFI DETIFGRSNP STVFNTITGG SRVSQEMAEA LNSALQDGLA LKRALEDNSN
EMKGLLRALC GEYIPSGAGG DLVRDGAGIL PTGRNIHAID PWRIPSELAF KRGKQIAESI
LQRHVEENGE YPETIAQVLW GLDTIKSKGE AVAVIVHLMG AEPAYDAQNK ISHYRLVPLE
KLGRPRVDVL IQISSIFRDT FGVLVDHLDK LVKDAARADE PHEMNHIKKH VDAALAEGKD
FESATSRLFT QAPGAYGSQV EELVEDSAWE SEEDLDNMFI KRTGFAYGGN RYGDQQTDIL
QGLLSTVDRV VQQVDSAEFG ISDIDRYFSS SGALQLSARR RNPKGDSVKL NYVETFTADV
KIDDADKALK VEFRTKLLNP KWFETMLEQG HSGAAEISNR FTYMLGWDAV TKGVDDWVYK
EAAETYAMDP KMRERLMKVN PKAFKNIVGR MLEASGRGMW SADPDMIEKL QEIYSDLEDR
LEGIEV
|
|---|
| |