Gene Cag_0223 details

Gene Information

• Locus tag: Cag_0223
• ID: 3747811
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 252467
• End bp: 252985
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637772750
• Product: single-strand binding protein
• Protein accession: YP_378544
• Protein GI: 78188206
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTTTTC TGCAACTCTT ATCTGAATTA GATGCTATGG CACGAAGTTT AAACAAAGTT 
ATGTTGATTG GTCATCTTGG TACCGATCCC GAATTGCGTA CAACAACCTC AGGGCAATCT 
GTGGCGAATT TTACCTTGGC TACGAATGAG AATTACAAGG ATAGTAGTGG TAATTTGCAA 
GAGCGCACGG AGTGGCATCG CATTATTGCA TGGGGGAAGC TTGCTGAAAT TTGCAATCAA 
TACCTCAAAA AAGGGCGTCA AGTGTATGTT GAAGGACGCT TGCAAACTCG AAGCTGGGAC 
GATCAAAAAA CAGGTGAAAA AAAGTACACT ACTGAAATTG TTTGTTCCGA TATGCAAATG 
CTTGGCTCGC CTCGTGAGCA AATGGGTGGT GAGTCAACCA TGCAGCCTTA CGACCAGTCA 
ACACTTCCTT CGCAATCATC CGCACCAAGT GTTATGCCAC CCGCTACACC AACAGTTCCA 
ACGATGATTG ATACAGATAA GGATGATTTA CCATTTTAA 

 

Protein sequence

MPFLQLLSEL DAMARSLNKV MLIGHLGTDP ELRTTTSGQS VANFTLATNE NYKDSSGNLQ 
ERTEWHRIIA WGKLAEICNQ YLKKGRQVYV EGRLQTRSWD DQKTGEKKYT TEIVCSDMQM 
LGSPREQMGG ESTMQPYDQS TLPSQSSAPS VMPPATPTVP TMIDTDKDDL PF