Gene Cag_0209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_0209 
Symbol 
ID3746696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp238027 
End bp239031 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content41% 
IMG OID637772736 
Productbacteriochlorophyll c synthase 
Protein accessionYP_378530 
Protein GI78188192 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01476] bacteriochlorophyll/chlorophyll synthetase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCTT CGGCATCTAT CGGGTTAACC AATAAAATTC GCGCTCACCT TGAACTACTT 
GATCCCGTAA CATGGCTTAG TGGATTTCCC TGCCTTGCCG CTGGTGTTAT GGCTTCGGGC
GGTATGCGTG GCACGTTGCA CGATTACCTT TTACTGCTTT TGGTTTTTCT TATGTATGGA
CCTTTTGGCA CAGGTTTTAG CCAATCGGTT AACGATGTGT TTGATTTAGA GCTTGATCGG
GTGAACGAAC CATCACGTCC CATTCCTTCA GGGCGTTTAA GTGAAAAAGA GGGTTTATGG
AATAGCATTA TTGTCTTACT GTTAGCGGCT GCAATAGGTT TTGGTTTATG GCTTCATATT
GGAGGAATGC GTGGATGGAT CATTCTTATT TCTATTCTTT CAGCCTTGTT TGTTGCCTAT
ATCTATTCAG CTCCACCGCT AAAACTGAAA AAAAATATTC TTGCTTCGGC ACCTGCTGTT
GGTTTTTCGT ATGGTTTTGT AACCTTTCTT TCGGCTAATG CCCTTTTCGG CGATATTCGT
CCTGAAGCAC TGTGGCTTGC GGGATTGAAT TTTTTTATGA CCGTAGCTCT TATCATTTTA
AATGATTTTA AATCGGTTGA AGGCGATAAA GAGGGTGGCT TAAAGTCGCT TACGGTAATG
ATTGGTGCGC GCAATACTTT TCTTGTTTCC TTTTTTATTA TTGATGCCGT TTTTGGCGTA
ATGGCATGGT TAGCCTATAC GTGGAGTTTT GTTGGTCTTT CCTACTTTAT ATTGGCAGGA
TTAGCAATTA ACATGTTTAT TCAAATGCAG CTTTTGCGCG ATCCTAAAGG TGGGCTTTCG
TTTGTTAATA TGGCTGTAGA TGATGGTTTT GGCAATGCCA TCGGTAAAAG CAATGTGCAG
GAACACAATA CTTTTCTCCG CTTTCAAGTG GTGAACAATA TTATTTTTAT GATTTCAAAC
CTTGTGTTAG CGGGAATGGT TGGTATGCAA TATATTCAAC CATAA
 
Protein sequence
MAASASIGLT NKIRAHLELL DPVTWLSGFP CLAAGVMASG GMRGTLHDYL LLLLVFLMYG 
PFGTGFSQSV NDVFDLELDR VNEPSRPIPS GRLSEKEGLW NSIIVLLLAA AIGFGLWLHI
GGMRGWIILI SILSALFVAY IYSAPPLKLK KNILASAPAV GFSYGFVTFL SANALFGDIR
PEALWLAGLN FFMTVALIIL NDFKSVEGDK EGGLKSLTVM IGARNTFLVS FFIIDAVFGV
MAWLAYTWSF VGLSYFILAG LAINMFIQMQ LLRDPKGGLS FVNMAVDDGF GNAIGKSNVQ
EHNTFLRFQV VNNIIFMISN LVLAGMVGMQ YIQP