| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0208 |
|---|
| Symbol | |
|---|
| ID | 3746695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 236460 |
|---|
| End bp | 237809 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637772735 |
|---|
| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
|---|
| Protein accession | YP_378529 |
|---|
| Protein GI | 78188191 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACG CCAACCCTGA CGCATTTTAC ATTCACACCT TTGGTTGCCA AATGAATCAA
GCCGATTCGG GCATTATGAC GGCGATTTTG CAAAACGAAG GGTATGTTGC TGCCTCCAAC
GAGGCAGATG CTGGTATTGT GCTGCTTAAC ACCTGTGCGG TGCGTGAACA TGCTACTGAG
CGCGTTGGGC ATTTGTTGCA GCATTTACAT GGGCGAAAAA AGCGTTCAAA AGGAAGATTG
CTTGTAGGCG TAACGGGGTG TATTCCCCAA TATGAGCGCG AAGTTCTCTT CAAAAATTAT
CCTGTTGTAG ATTTTCTTGC TGGTCCCGAT ACCTATCGTT CCTTACCATT GCTCATTAAG
CAGGTGCAGC AAGCAGGTAA GGGAGCTACG GAAGCGGCAT TGGCGTTTAA TAGTGCTGAA
ACGTATGATG GCATTGAGCC TGTACGTTCA AGCAGTATGA GTGCGTTTGT GCCGGTGATG
CGAGGTTGCA ACAACCATTG TGCCTATTGT GTTGTGCCAC TCACACGAGG GCGCGAGCGA
AGCCATCCCA AAGCTGCCGT GCTGAACGAA GTGCGTCAAC TTGCCGAAGC GGGTTATCGT
GAAATTACCT TGCTTGGGCA AAATGTGAAC TCCTATTACG ATCCGTTAGC GCAATGCAAT
TTTGCGGAGT TGCTTGCCGC TGTGAGCTGT GCAGCTCCAG CAACGCGCAT TCGTTTTACC
ACATCGCACC CCAAAGATAT TTCCGAAGCC TTAGTGCGCA CCATTGCAGA GCATTCCAAC
ATTTGCAATC ACATCCATTT ACCCGTGCAG TCAGGCTCAA GCCGCATTTT GCGCCTTATG
CAGCGAGGGC ACACCATTGA AGAGTATCTC GAAAAAATTG CTCTTATTCG ATCGCTCATT
CCCAATGTTA CCCTCTCTAC CGATATGATT GCTGGTTTTT GTGGCGAAAC TGAGGCTGAC
CATCAAGCCA CGCTTCGTTT GCTTGAAGAG GTGCAATTTG ACTCGGCTTT TATGTTTTAC
TACTCGCCTC GTCCACGCAC GCCAGCGGCT GAAAAGCTTA CCGACGATGT GCCCGAAGCG
CTTAAAAAAG CTCGCTTGCA GGAAATTATT GAGTGCCAAA ACCGCATTTC AGCCTCACTT
TTTAGCCAAG CGGTCGGTTC CGTGGTTGAA GTGTTAGCCG AAGCTGAAAG TCGTCGTTCA
TCGGAGCAAT TAATGGGGCG AACGGCAGGC AATCGCACGG TGGTGTTTGC TCGCAATGGC
TATCAAGCGG GTGATGTGCT TCATGTGCGC ATTACGGGTT CCACTTCTGC CACGCTGCTT
GGCGAGCCAT TAATCTCTAC CACACTATAG
|
|---|
| Protein sequence | MTNANPDAFY IHTFGCQMNQ ADSGIMTAIL QNEGYVAASN EADAGIVLLN TCAVREHATE
RVGHLLQHLH GRKKRSKGRL LVGVTGCIPQ YEREVLFKNY PVVDFLAGPD TYRSLPLLIK
QVQQAGKGAT EAALAFNSAE TYDGIEPVRS SSMSAFVPVM RGCNNHCAYC VVPLTRGRER
SHPKAAVLNE VRQLAEAGYR EITLLGQNVN SYYDPLAQCN FAELLAAVSC AAPATRIRFT
TSHPKDISEA LVRTIAEHSN ICNHIHLPVQ SGSSRILRLM QRGHTIEEYL EKIALIRSLI
PNVTLSTDMI AGFCGETEAD HQATLRLLEE VQFDSAFMFY YSPRPRTPAA EKLTDDVPEA
LKKARLQEII ECQNRISASL FSQAVGSVVE VLAEAESRRS SEQLMGRTAG NRTVVFARNG
YQAGDVLHVR ITGSTSATLL GEPLISTTL
|
|---|
| |