Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0201 |
Symbol | |
ID | 3746688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 229604 |
End bp | 230347 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637772728 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_378522 |
Protein GI | 78188184 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCTGT TTTACACACC AACGGAGCAG ATTCATCCAG CAACCAATCA GGTCAGCATT GAAGGTGAGG AGTTTCACCA CCTTGTGCGC GTGTTGCGTA AGCGCGAAGG CGAACTAATT TTGGTAACCG ATGGCAACGG TTTGCGTTGC GAAGTGCGCA TTGCCTCCAT TAGCAAGCAC GATGTGCAAG GCGAAATAAT TAGTACCACA ACCATTGAGC CACCATCCAC TCGTGTAACC GTAGCCCTTT CATTGCTTAA AAATCCCCAG CGGTTTGAAT GGTTTTTAGA AAAAGCAACT GAACTTGGCA TTTCCACCAT TATTCCCATG GTTACCGCCC GAACCGTTGT GCAACCCTCT AACGATCGGG TTCACAACAA GCTCAAGCGG TGGCGAACCA TTGTGCTATC GGCAGCACGG CAATCAAAGC GCTACTATCT GCCCCAAGTG GTTGAACCAC AACGTTTTAG CGATGTGCTT AACCGCTCAG GTTACGATGA ACGCTGTATG CCATTTGAAG CCGCCACCTC ATCACCAACG CTGCATTGTG CTGGCAAAAA TATTCTTTTT CTGATTGGGG GAGAAGGTGG GTTTAGTGCC GAAGAGGTGC AGCAAGCAGA AGCCACAGGG TGCCGCACCA TGTCGCTTGG CACCACCATT TTACGAGCTG AAACTGCCGC ACTCTTTGCG GTGGCTTACG TGCGCTCGCA ACTCCTTACC GAAGCGCCAT CAGCATGGCT GTAA
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Protein sequence | MELFYTPTEQ IHPATNQVSI EGEEFHHLVR VLRKREGELI LVTDGNGLRC EVRIASISKH DVQGEIISTT TIEPPSTRVT VALSLLKNPQ RFEWFLEKAT ELGISTIIPM VTARTVVQPS NDRVHNKLKR WRTIVLSAAR QSKRYYLPQV VEPQRFSDVL NRSGYDERCM PFEAATSSPT LHCAGKNILF LIGGEGGFSA EEVQQAEATG CRTMSLGTTI LRAETAALFA VAYVRSQLLT EAPSAWL
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