Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0188 |
Symbol | |
ID | 3747714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 215376 |
End bp | 216629 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637772715 |
Product | hypothetical protein |
Protein accession | YP_378509 |
Protein GI | 78188171 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0706904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCAG ATAACTTCAG GTTGCAATTG GGCAGCAAAG AATACGTTCC AATTATTATT GGTGGTATGG GGGTTAATAT TTCCACAGCA GAACTTGCGC TTGAGGCGGC GAGGCTTGGT GGTATTGGTC ATATTTCTGA TGCTGTTGTA ACCTATATTT GCGATCAGTT ATTTAAGACC TCGTATGTTA GCCGTAAGCG GAAGCAGTAT GCGGCATATA GCAATAGTCC CGATAAATCG GCAGTGCTGT TTAACTTAGA GGAGCTTGCT GAGGCGCAAA AAAAATACAT TGAGAATACC ATAGCAAGAA AAAAAGGTGA TGGCGCTATT TTTCTTAATT GCATGGAAAA GCTCACCATG AATAACTCTG CTGAAACGCT TAAGGTGCGT CTTTCGGCGG CAATGGATGC TGGCATTGAT GGCTTAACGC TTGCGGCAGG TTTAAATATT CGCACGCTTG ATTTAATTAG CGACCATCCT CGTTTTCGTG ATGTAAAAAT TGGAATTATT ATTTCCTCCG TTCGGGCGCT CTCTATCTTT TTAAAGCGAG CCGTGCGCCT CAATCGCTTG CCTGACTACA TTATTGTTGA AGGACCATTA GCGGGCGGGC ATCTTGGTTT TGGTGCCGAT AATTGGCACA TGTTCGATTT AAAAACCATT TTTACCGAAG TCGTTGATTT TCTTGCGAAG GAGGATTTAC ACATTCCTGT AATTCCTGCT GGCGGTATTT TTACGGGTAC CGATGCGGTA GAGTATCTCC AAATGGGAGC AGGTGCTGTG CAGGTAGCAA CACGCTTTAC CATCAGTAAA GAAGCTGGAT TACCGTGTGA TGTAAAGCAG CACTACTTAA ATGCGCGTGA AGAAGATATT GTGGTGAATA TGGCTTCTAC GTCGGGTTAC CCCATGCGCA TGTTAGTGCA ATCGCCAACG TTGCGCTACG CCATTCGTCC AAATTGCGAA GGGCTTGGTT ATTTGCTTGA AAATGGGGGA AAGTGCTCCT ACATAGATGC TTATTATGAG GCGTTAGAAA ATCGTAAAGA GGGTGAACCG CTTTCGGTAA AAATAAAAAC CTGCCTCTGT ACAGGTATGG CAAATTATGA TTGTTGGACG TGTGGACAAA CTACCTACCG TTTAAAGGAA ACCACGAATC GTTTGCCTGA TGGTAAGTGG CAGCTTCCTT CAGCCGAAGA TATTTTCCTT GATTATCAGT TTAGTAGCGA TCATGCTATT CAACGTCCAA AACCTGAAGC ATAG
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Protein sequence | MNADNFRLQL GSKEYVPIII GGMGVNISTA ELALEAARLG GIGHISDAVV TYICDQLFKT SYVSRKRKQY AAYSNSPDKS AVLFNLEELA EAQKKYIENT IARKKGDGAI FLNCMEKLTM NNSAETLKVR LSAAMDAGID GLTLAAGLNI RTLDLISDHP RFRDVKIGII ISSVRALSIF LKRAVRLNRL PDYIIVEGPL AGGHLGFGAD NWHMFDLKTI FTEVVDFLAK EDLHIPVIPA GGIFTGTDAV EYLQMGAGAV QVATRFTISK EAGLPCDVKQ HYLNAREEDI VVNMASTSGY PMRMLVQSPT LRYAIRPNCE GLGYLLENGG KCSYIDAYYE ALENRKEGEP LSVKIKTCLC TGMANYDCWT CGQTTYRLKE TTNRLPDGKW QLPSAEDIFL DYQFSSDHAI QRPKPEA
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