Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0187 |
Symbol | gpmA |
ID | 3747713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 214160 |
End bp | 214903 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637772714 |
Product | phosphoglyceromutase |
Protein accession | YP_378508 |
Protein GI | 78188170 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0588] Phosphoglycerate mutase 1 |
TIGRFAM ID | [TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00937723 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAAC TTGTATTACT GCGCCACGGC GAAAGCCAAT GGAACCGTGA AAATCGCTTT ACTGGCTGGC ACGATATTGA TTTAACTGAC CAAGGGCGCA TAGAAGCCTC AAATGCTGGC AAGTTGCTCC GTGCCGAAGG CTTTACTTTT GATATTGCTT ACACCTCCGT GCTCAAGCGT GCCATTAGAA CCTTATGGCA TGTATTGGAT GAAATGGATT TGATGTGGCT ACCTGTTACC AAAAGCTGGC GTTTAAATGA GCGCCATTAC GGTGCCTTGC AAGGCTTAAA CAAAGCGGAA ACCGCACAAA AATATGGCGA AGAACAGGTG CTTGTGTGGC GCCGTAGCTA CGACACCCCA CCTCCAGCAC TTGAAAAAAG TGATGCTCGT TACCCCGGCT CTCAAGCTCG CTATGCAAGT TTAAGCGAAG CTGAAGTTCC GCTTACTGAA TGTTTAAAAG ATACCGTTGC TCGTTTTCTG CCTCTTTGGC ACGAAACCAT TGCACCCGAA ATTCGCAAAG GGCGCAACGT TATTATTGCG GCTCACGGCA ACTCTATTCG TGCATTGGTA AAATATCTTG ATAATGTGTC GGAAGATGAT ATTGTAGGAA TTAATATTCC AACGGGTATT CCGTTGGTGT ATGAATTAGA TGATGATCTC AAGCCAATTC GCAGCTACTA CCTTGGCGAT CAAGATGCAC TGAAAAAAGC ACAAGAAGCC GTTGCAAAAC AAGGAAAAGC GTAA
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Protein sequence | MIKLVLLRHG ESQWNRENRF TGWHDIDLTD QGRIEASNAG KLLRAEGFTF DIAYTSVLKR AIRTLWHVLD EMDLMWLPVT KSWRLNERHY GALQGLNKAE TAQKYGEEQV LVWRRSYDTP PPALEKSDAR YPGSQARYAS LSEAEVPLTE CLKDTVARFL PLWHETIAPE IRKGRNVIIA AHGNSIRALV KYLDNVSEDD IVGINIPTGI PLVYELDDDL KPIRSYYLGD QDALKKAQEA VAKQGKA
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