| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0179 |
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| Symbol | |
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| ID | 3747705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 200023 |
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| End bp | 202797 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637772706 |
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| Product | DNA polymerase A |
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| Protein accession | YP_378500 |
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| Protein GI | 78188162 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATGC TTTACCGTGC TTTTTTTGCG TTGCAGCGCA CAGGCATGAG TAGCCCTTCG
GGGTTGCCAA CGGGTGCGCT CTACGGCTTT ACCACAGCGT TGCTTAAAAT TTTTGAGAAT
TATCATCCTC ACTACTTAGT TGCGGCATTT GATAGCCGCG AAAAAACCTT TCGCCACCAT
TTGCTTGAGA GCTATAAGGC AAATCGTGCA GCTCCACCTG AAGAGCTGTT ACAGCAACTT
GAAAAGTTGT TTGAGTTGTT GAAAGCTTTT GGAGTGCCTG TTATTAAGCA AGCGGGTTAT
GAAGCTGATG ATCTTATTGG CGCGATGGTT ACTCAGTTTG CGGATGTTTG CCGCATTGGC
ATTGTTACGC CCGATAAAGA TTTAGCGCAG CTTGTGCGCG AAGGTGTGCA AATTTTAAAG
CCGGGGAAAA ATCAGCATGA GTTAGAGCCG CTTGGTTGCA ATGAGGTGAA AGCTCACTTT
GGCGTTCCTC CCAAACAATT CACCAATTTT TTAACCTTAA CCGGTGATAC GTCGGATAAC
ATTGTGGGCG CTAAAGGCAT TGGTCCAAAA ACCGCCGCAA CCTTGCTTGA AAAATATCAA
ACCTTAGATA AGCTTTACCA ACACTTGGAT GAGTTAACGC CAAAGGTGCG GAAAAGCCTT
GAGGATTTTG CACCGAATCG GGAGTTGGTG CTGCAACTTG TTACCATTTG CTGCGATGCG
CCGCTCCATG TTACGTTAGA GGAACTTGCT TGCAAAAATC CCGCACGAGA TGTTGTGCTG
CCGCTCTTGC AAGAGTTGGG CTTCCGTACC ATTGCTGCTC GTTTACAAGC TGCGTCCGTG
GCACTTACAT GCGCTTGTAA TGATGGGGGG GAAAGTGCTC CACCAATGCA AAGCGATCCT
AATAGTTCCA ACCTTTTAAA CGGAAGTGAT GGCAATACTT CGGCAACCGA TACCGCTCCC
CCACCATCAT TCCCAGACGT TCCTCGCCAT TACACCCTTG TAGAAACAAG AGAGCAATTG
CAGGCGTTGC TTGAGGAGTT GCAACAGGTT ACGCATATAG CGGTTGATAC CGAAACCACA
AGCCTTGATG TTTTTGAAGC TGAGCTGGCA GGAATTTCGC TTTGTGCTGA AGCGGGTAAA
GCATTTTTTA TTGCCACTAC GCCCGATGCT CTTGAGAGAA AAGAGGTTGT CAAGCAACTC
AAACCACTGC TTGAAAATCC CGCAATTACG AAAAGCGGGC AGAATTTGAA GTACGATATG
CTGGTGCTGA AAAAGTATGG CATTGAACTT GCACCCATCA GCTTTGATAC CATGCTTGCA
AGTTATGTGC TTAACCCCGA TGAGCACCAC AATCTCGACG ACATGGCACT GCGTTACCTT
GGGCGCACCA CCACCAAGTA TGATGAGCTT ACGGGCACAG GCAAACAGCG CCGCCATATT
TTTGAGGTGG AAAAAGAGGC ACTCACCAAC TACGCCTGCC AAGATGCCGA TGTGGCTTTT
CAACTGGAAG AGGTGCTGCA AGCCCAACTG CAAGCCGAGC CGCAACTGCT GGCACTTTGC
ACCACTATGG AGTTCCCGCT TGTGCGCGTG TTAGCAACAA TGGAGTATGC TGGTATTGCT
ATTGATACCG AGCATCTTGC CCGTGTAGCC GAAACCACCG AGCTGGAACT TCAATCCTTA
ACAGACAACA TTTACGCGGC GGCTGGTAGC TCTTTTAATA TTGATTCACC CAAACAGCTT
TCGCACGTAC TCTTTACCGA TCTTAGCTTG CCAACAGGTA AATCCACCAA AACAGGCTTT
TCAACCGATG TTGGCGTTTT GGAGGAGTTG GCTGCAACCT ACCCCATCGC AAGCGATTTA
CTGAGCTACC GCACGTTGCA AAAGTTAAAA GGAACCTACA TTGAGGCGCT GCCAAAAATA
ATCAATCCAC GCACAGGACG CATTCATACC TCCTTTAACC AGCACATTAC CGCAACGGGC
AGGCTCTCAT CCTCAAATCC CAACCTGCAA AACATTCCCG TTCGCACGGC GCTTGGTAAG
GAAATTCGCC GCGCCTTTAT TCCTTCAACC CCCGAACATT GGCTGCTTTC GGCTGATTAC
TCGCAAATTG AGCTGCGCAT TGCCGCTGAG CTTTCGGGCG ATGAGCGCTT GATTGCTGCT
TTCCGCAACG GCGAGGATAT TCACACCGCA ACGGCACAAG TGATTTTTGG AACGGAGGAA
ATTAGTAGCG ATATGCGCCG CAAAGCTAAA GAGGTGAACT TTGGCGTGCT CTACGGCATT
CAGCCTTTTG GGTTAGCAAA GCGCTTGAAC ATTCCCCAAA AAGAGGCAAA AGTTATTATT
GAAACCTATA AAGCTAAATA TCCACAGCTC TTTAATGTGT TGCGCCATAT TATTGAGGAG
GGAAAAGAAA AAGGCTACGT TACCACCCTT TTGGGGCGAC GACGCTACAT TGCTGACCTT
AACAGCCGCA ATGGCACCGT ACAAAAAGCT GCCGAACGCG CCGCTATGAA TACGCCCATT
CAAGGTACAG CGGCAGATAT TATTAAGTGC GCTATGAACC TTTGTTATCA GCAAATGCAA
GCGTCAGGCA TGGCTTCCGA AATGCTCTTG CAAGTGCATG ATGAATTGCT TTTTGAAACC
ACTGATAGCG AAAAAGAGGC ACTAACAAAG CTTGTAGAAA ATGCCATGAA AGAGGCTGCG
GTGCTTTGCG GCATGAAGCA AGTGCCGGTG GAGGTTGATT GCGGAGTTGG AAAAAATTGG
CTTGAAGCCC ATTGA
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| Protein sequence | MAMLYRAFFA LQRTGMSSPS GLPTGALYGF TTALLKIFEN YHPHYLVAAF DSREKTFRHH
LLESYKANRA APPEELLQQL EKLFELLKAF GVPVIKQAGY EADDLIGAMV TQFADVCRIG
IVTPDKDLAQ LVREGVQILK PGKNQHELEP LGCNEVKAHF GVPPKQFTNF LTLTGDTSDN
IVGAKGIGPK TAATLLEKYQ TLDKLYQHLD ELTPKVRKSL EDFAPNRELV LQLVTICCDA
PLHVTLEELA CKNPARDVVL PLLQELGFRT IAARLQAASV ALTCACNDGG ESAPPMQSDP
NSSNLLNGSD GNTSATDTAP PPSFPDVPRH YTLVETREQL QALLEELQQV THIAVDTETT
SLDVFEAELA GISLCAEAGK AFFIATTPDA LERKEVVKQL KPLLENPAIT KSGQNLKYDM
LVLKKYGIEL APISFDTMLA SYVLNPDEHH NLDDMALRYL GRTTTKYDEL TGTGKQRRHI
FEVEKEALTN YACQDADVAF QLEEVLQAQL QAEPQLLALC TTMEFPLVRV LATMEYAGIA
IDTEHLARVA ETTELELQSL TDNIYAAAGS SFNIDSPKQL SHVLFTDLSL PTGKSTKTGF
STDVGVLEEL AATYPIASDL LSYRTLQKLK GTYIEALPKI INPRTGRIHT SFNQHITATG
RLSSSNPNLQ NIPVRTALGK EIRRAFIPST PEHWLLSADY SQIELRIAAE LSGDERLIAA
FRNGEDIHTA TAQVIFGTEE ISSDMRRKAK EVNFGVLYGI QPFGLAKRLN IPQKEAKVII
ETYKAKYPQL FNVLRHIIEE GKEKGYVTTL LGRRRYIADL NSRNGTVQKA AERAAMNTPI
QGTAADIIKC AMNLCYQQMQ ASGMASEMLL QVHDELLFET TDSEKEALTK LVENAMKEAA
VLCGMKQVPV EVDCGVGKNW LEAH
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