Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0165 |
Symbol | |
ID | 3747730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 185792 |
End bp | 186544 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637772692 |
Product | hypothetical protein |
Protein accession | YP_378486 |
Protein GI | 162319775 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGGAC ACAGCAAGTG GGCAACAATA AAGCGCAAAA AAGCTGCCAC CGATCAAAAA AGGGGTAATC TTTTCACAAA GTTAGTAAAG GAAATCACTA TTGCCGCTAA AATGGGCGGT GGCGATCCTA CAGGTAACCC TCGTTTGCGT CTTGCTATTG ATACCGCTCG TAGCAATTCC ATGCCTATGG ATAACATTCA GCGTGCTATT AAAAAAGGTA CGGGCGAGTT GGATGGGGTA AGCTGGGATG AAATTACTTA CGAAGGCTAT GGCCCTGCTG GTATTGCGTT AATTATTGAA ACGGCTACCG ATAATCGTAA TCGCACCGTT GCTGATTTAC GCCATATTAT GAGCCGCAAT AATGGTTCGC TGGGCGAAAG CGGCAGTGTG GCGTGGATGT TCCAACGTAA GGGGTCGCTT GATGTGCCTC ATTCCGCTGT AAGCGAGGAG CAGCTTATGG AGTTGTTGCT TGATGCTGGG CTTGAGGATT TAGATCAGGA TGATGAGAAT TATTTTACGG TTATTACCGA TATAAAAGAT CTTGAGTCAG CAAAAAAGGC GTTGGATGAG GCTGGAATTG CTTATGAAAA TGCTAAGATT GACTTAATCC CCGATAACTA CATTGAGCTT GATGCCGATG ATGCCGCTAA AGTGATGAAG CTGATTGATG CGCTTGAAAG TAATGACGAT GTACAAGCTG TTTATAGCAA CATGGAGCTA AGTGAAAGCG CCATGAATAG CTTGAGCGAG TAA
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Protein sequence | MSGHSKWATI KRKKAATDQK RGNLFTKLVK EITIAAKMGG GDPTGNPRLR LAIDTARSNS MPMDNIQRAI KKGTGELDGV SWDEITYEGY GPAGIALIIE TATDNRNRTV ADLRHIMSRN NGSLGESGSV AWMFQRKGSL DVPHSAVSEE QLMELLLDAG LEDLDQDDEN YFTVITDIKD LESAKKALDE AGIAYENAKI DLIPDNYIEL DADDAAKVMK LIDALESNDD VQAVYSNMEL SESAMNSLSE
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