Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0160 |
Symbol | |
ID | 3747725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 180237 |
End bp | 181553 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637772687 |
Product | TPR repeat-containing protein |
Protein accession | YP_378481 |
Protein GI | 78188143 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00134878 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTC TACTTAATAA GCTTGTTATT ATTTTTGAAT TCGTTGTCGG AGTTACAACT CTTCTGCTGG GAGCGGATTT TCTGGGTGTA GAGTGGAAAC AGTATCCATT TCTGCAAAGA CTTGATGGTC AACAACCTCT GTTGTTACTC TTAACTTTCT GTTCACTATT GTCAATATTG GTCATTAAAC TAAAAAATAA TTCTCCTGCG TTTGAAGCCG TGCAAACAAA AGATGGTACA ACCATCGTTA AAGCTACACT TTCAGGCTTT GAGCAAGAGT TGGACGATGC GGCTGATGAG ATCAAAAAGA AAGCACAAGA GTACTTTGAA GCTGGTGAGC GTGATTTTGC CAATGAGCAG TATGCACAAG CAGCAAGCAA CTATAAAGCT TCGTTTGAGC TATTGCCAAC AATGGCTGCC AGCTTGAACG CCGGTATTGC TTTTAGTATC ACATCGGATT ACCAAGCAGC AGAAGAGCTT TATCAACAAG GATTGAGAAT AGCACAACAT AAAAGAGATA AAGAGTATGA AGCTGCTTTT CTTGGCAACA TTGGGGTCGG TTATAGATCC TCAGAAAAAT TCGCTGATGC TCTCGACTAC CAACAGAAAG CGTTCAAGCT TAACCAAACG ATCAGAAATC AGAGAGGACA AGCTAACCAA TTGTGCAATA TTGGACTTAT TTACAACGAC AAAGGTCTGC TCGATGCGGC TCTTGGATAT TTCAAACAAT CGCTGGAGTT ATACGAAACC ATTGGAGACA CATCAGGGCA GGCTCAAAAC CTCAGATCAA TCGGAATAAT TTATAGGAGA AAAGGCAAAC TCAACGAGGC ACTCTCTTGC CACCAGCAAG CTCTTAATAT TGACAAAGCT AATAAAAACG CTTCAGGAGA AGCTGAAAAC CTTAACAATA TCGGAATCAT TTATAAGGGG AAAAAAGAAT TTGACAAGGC ACTTAATTGC TGCTATCAGG CACTTGATAT ATGTAAACGT ATAGGATACA AATTTGGAGA GGGTCTTGCA TTATCAGCTA TCGGCGTAAT TTATTACTCA AAAGGAGAAC TTGATAACGC TCTTGATTAC TGTAATCAGG CGCTTAAGCT TTACAAAAGC ATAGATTCCC ATCTTATTGC ACAGGCCGAA AACCTTAATA ACATTGGTCT AATTTATCAA GATAAAGGAC AACTCGATCA AGCGCTTATA TATCTGGGGC AATCGTACTT ACTTTTCCAG AAGACAGGAG TAACTTTACA ATTGAAAAAA ACCGAAGCAA ACATTCAAGA AGTTAAGCGA CTACAAGCCG CAAAGGGCAA AAATTAG
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Protein sequence | MNILLNKLVI IFEFVVGVTT LLLGADFLGV EWKQYPFLQR LDGQQPLLLL LTFCSLLSIL VIKLKNNSPA FEAVQTKDGT TIVKATLSGF EQELDDAADE IKKKAQEYFE AGERDFANEQ YAQAASNYKA SFELLPTMAA SLNAGIAFSI TSDYQAAEEL YQQGLRIAQH KRDKEYEAAF LGNIGVGYRS SEKFADALDY QQKAFKLNQT IRNQRGQANQ LCNIGLIYND KGLLDAALGY FKQSLELYET IGDTSGQAQN LRSIGIIYRR KGKLNEALSC HQQALNIDKA NKNASGEAEN LNNIGIIYKG KKEFDKALNC CYQALDICKR IGYKFGEGLA LSAIGVIYYS KGELDNALDY CNQALKLYKS IDSHLIAQAE NLNNIGLIYQ DKGQLDQALI YLGQSYLLFQ KTGVTLQLKK TEANIQEVKR LQAAKGKN
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