| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0130 |
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| Symbol | hemE |
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| ID | 3747081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 146461 |
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| End bp | 147516 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637772657 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_378451 |
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| Protein GI | 78188113 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0339923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAAAA ATGATCTTTT TCTGCGGGCA TTAAAGCGCC AGCCATGCTC ACGTACACCA
ATCTGGGTGA TGCGCCAAGC TGGTCGTTAC CTTCCTGAAT ACCGTGCTGT AAGAGAAAAA
ACTGACTTTT TAACGCTCTG TAAAACCCCA GAGTTAGCTA CTGAGGTAAC CATTCAGCCT
GTGGAATTAG TGGGCGTGGA TGCTGCAATT ATTTTCTCTG ACATTCTTGT TGTGAATGAA
GCAATGGGAC AAGAGGTAAA TATTATTGAA ACCAAAGGTA TTAAGCTTGC TCCACCAATT
CGTTCACAAG CTGATATTGA TAAGCTTATT GTTCCTGATA TTGATGAAAA GCTGGGTTAT
GTGCTTGATG CACTTCGCAT GACCAAAAAA GAGCTTGATA ACCGTGTGCC GCTGATTGGC
TTTAGCGGAG CTGCTTGGAC GCTCTTTACC TATGCGGTTG AAGGTGGTGG TTCTAAGAAC
TACGCTTACG CAAAACAAAT GATGTACCGT GAGCCACAAA TGGCGCACTC ATTGCTCTCA
AAAATCTCAC AAACCATTAC CGCTTATACG CTGAAGCAAA TTGAAGCGGG CGCTGATGCT
ATCCAGATTT TTGATTCATG GGCAAGTGCT TTGTCGGAAG ATGATTATCG CGAATATGCA
CTTCCTTACA TTAAGGATAC CGTGCAAGCT ATTAAAGCAA AGCATCCCGA AACTCCTGTG
ATTGTTTTCT CAAAGGATTG CAACACCATT CTTTCGGATA TTGCTGATAC TGGTTGCGAT
GCTGTTGGGC TTGGCTGGGG AATTGATATT AGTAAAGCTC GTACTGAGTT GAACGACCGT
GTAGCGTTGC AAGGTAACCT TGATCCAACG GTGCTTTATG GCACGCAAGA GCGCATTAAA
ATTGAAGCAG GTAAAATTTT AAAATCGTTC GGGCAGCATA ACCATCATTC AGGGCATGTT
TTTAACCTTG GTCACGGCAT CCTTCCTGAT ATGGATCCCG ACAACTTAAG ATGCTTGGTA
GAGTTTGTTA AAGAGGAGAG CGCAAAGTAT CACTAA
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| Protein sequence | MLKNDLFLRA LKRQPCSRTP IWVMRQAGRY LPEYRAVREK TDFLTLCKTP ELATEVTIQP
VELVGVDAAI IFSDILVVNE AMGQEVNIIE TKGIKLAPPI RSQADIDKLI VPDIDEKLGY
VLDALRMTKK ELDNRVPLIG FSGAAWTLFT YAVEGGGSKN YAYAKQMMYR EPQMAHSLLS
KISQTITAYT LKQIEAGADA IQIFDSWASA LSEDDYREYA LPYIKDTVQA IKAKHPETPV
IVFSKDCNTI LSDIADTGCD AVGLGWGIDI SKARTELNDR VALQGNLDPT VLYGTQERIK
IEAGKILKSF GQHNHHSGHV FNLGHGILPD MDPDNLRCLV EFVKEESAKY H
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