Gene Cag_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_0045 
Symbol 
ID3747244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp51249 
End bp52259 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content50% 
IMG OID637772571 
Productaminodeoxychorismate lyase 
Protein accessionYP_378367 
Protein GI78188029 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.266308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTC CTCGCTCTTT TATTACTCGC CTAATTCTTG CGGTTACTTT GCTGATAGCC 
GCATTCCCGC TTGGCTTTTT GTTGATACCG GGACTTAATA GTAAGAGCAA ACCAACGCAA
TTAGTGGTGC ATCGTGAAAT GCGCTTTAGC GATGTGCTCG ACAAGTTGCA AGCAAGTGGC
GCAATTCGTG AACGGTGGCA GCCAGAGCTA ATTGCACGCA TGGTACCAAA ATTCCGCACG
ATAAAAGCTG GACGCTACAC CATTCCCCCC AACACCTCGA ACTTTGGCTT ACTGTGGTAC
CTCCGCACGC ACCCGCTTGA CGAAGTGCGC GTTACCCTGC CCGAAGGTAT TGATAGACGC
AAAATGGCAC GCATTCTTTC GCGCAAGCTT GATTTTGACT CCACGCAGTT TATGGCTGCA
ACCGAAAATC CTCGTTTACT TGCAAAATAT GGCATTCGTG CCAGCCACGC CGAAGGCTAC
TTGCTACCAG GAACCTATGA TTTTGCATGG GGCAGCTCAC CTGATGAAGC GGCAAGCTTT
CTTATTCGTC AATTCAAAAA ATTGTACACC ACCGAACGGC AGCAACGCGC CGCAGCGCTT
GGCTTTAACG AGCATAGCCT CCTGACGCTT GCCTCCATTG TAGAAGCCGA AACGCCGCTT
GATAAAGAAA AGCCCACGGT AGCCAGCGTT TACTTACATC GCTTACGCAT TGGAATGCGC
TTGCAAGCTG ACCCTACCGT CCAGTACGCC CTTGGAGGCA CCACACGCCG CTTGTACTAC
AAAGACCTTG CAATTGCCTC CCCCTACAAC ACCTACCGCA ATAAAGGTTT ACCCCCTGGA
CCTATCTGCA ATCCGGGCAA AGCTTCAATT ATAGCCGTCT TAAACGCCCC TCAAAGTGGC
TATCTCTATT TTGTAGCAAC AGGTACAGGC GGACATTACT TTGGCGCATC GCTACAAGAA
CATCATGCAA ATGTACAGAA GTATAAACAG GCACGTAGTA GTAACGAATA A
 
Protein sequence
MKSPRSFITR LILAVTLLIA AFPLGFLLIP GLNSKSKPTQ LVVHREMRFS DVLDKLQASG 
AIRERWQPEL IARMVPKFRT IKAGRYTIPP NTSNFGLLWY LRTHPLDEVR VTLPEGIDRR
KMARILSRKL DFDSTQFMAA TENPRLLAKY GIRASHAEGY LLPGTYDFAW GSSPDEAASF
LIRQFKKLYT TERQQRAAAL GFNEHSLLTL ASIVEAETPL DKEKPTVASV YLHRLRIGMR
LQADPTVQYA LGGTTRRLYY KDLAIASPYN TYRNKGLPPG PICNPGKASI IAVLNAPQSG
YLYFVATGTG GHYFGASLQE HHANVQKYKQ ARSSNE